Streptococcus thermophilus S9: AVT04_02865
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Entry
AVT04_02865 CDS
T04785
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
sths
Streptococcus thermophilus S9
Pathway
sths03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sths00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AVT04_02865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sths03019
]
AVT04_02865
Messenger RNA biogenesis [BR:
sths03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AVT04_02865
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KhpA-B_KH
RRF
KH_2
Motif
Other DBs
NCBI-ProteinID:
ALX90865
LinkDB
All DBs
Position
complement(550043..551650)
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AA seq
535 aa
AA seq
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MINMIILVVFALIGLVVGYSAISIKLSKAKEQAETILLKAEQDAVNLRSQAEHDADHLRV
TAERESKAQRKELLLEAKEKARKYREDIEEEFKSERQELKQMENRLTERATSLDRKDENL
SSKELALEKKEQSLADKSKHLNEREENVTQLEAEKQAELERIGQMTIAEAREVILTETEN
NLTHEIATRIKDAEAQIKDTVDKKAKNLLAQAMQRLSGDYVTEQTVTTVHLPDDNMKGRI
IGREGRNIRTLESLTGIDVIIDDTPEVVVLSGFDPIRREIARMTLEALIKDGRIHPARIE
ELVEKSRKEMDNRIREYGEEAAYEIGAMNLHPDLIKIMGRLQFRTSYGQNVLRHSVEVGK
LAGIMASELGENVALARRAGFLHDMGKAIDKEVEGSHVEIGTEFARKYKEHPVVVNAIAS
HHGDVEPESVIAVIVAAADALSSARPGARNESVENYVKRLRDLEEIASSFDGVQTSFALQ
AGREIRIMVHPNKISDDEVTILSHKIREQIEKNLDYPGNIKVTVIREFRAVDYAK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgataaacatgataattttagttgtctttgcactcattggtttagtcgttggatattca
gcaatttctatcaaacttagcaaagctaaggaacaagcagaaactatcttgctaaaggca
gaacaagacgctgtgaatcttcgtagtcaggcagaacatgatgcagatcatctacgtgta
actgctgaacgcgaaagtaaggctcaacgtaaagagctcttgttagaggcaaaagagaaa
gctagaaaatatcgagaagatattgaagaagaattcaaatctgaacgtcaagagcttaaa
caaatggagaatcgtttaacagaacgtgcaaccagccttgatcgtaaggatgaaaatcta
tcaagtaaagaactcgccctcgagaaaaaagagcagagtcttgctgacaaatctaaacat
cttaatgagcgtgaagagaatgtgactcagttggaggctgagaagcaagctgaacttgaa
cgtattggtcaaatgaccattgcagaggcgcgtgaggtaatcttaacagagactgaaaat
aatcttactcatgagattgcaacacgtatcaaagatgcagaagcacagatcaaagatact
gttgataagaaggccaaaaacttgttggcgcaagctatgcaacgtttgtctggggattat
gttactgaacaaaccgtaaccactgttcacctcccagatgataatatgaaaggtcgtatc
attggtcgtgaggggcgtaacattcgtacccttgaaagcttaacaggtattgatgttatc
atcgatgatactccagaagtggttgttctttctggttttgatccaatccgtcgtgagatt
gctcgcatgactctcgaagccttgattaaggatggacgtatccatccagctcgtattgag
gagttggttgagaagagtcgtaaggaaatggataaccgtatccgcgaatatggtgaagag
gcagcttacgaaattggggctatgaatctccaccctgacctaatcaagattatgggacga
ttgcagttccgtacttcatatggtcaaaacgtacttcgtcactcagttgaagttggtaaa
ctagcaggtattatggccagtgaattgggtgagaatgtggctctagctcgtcgtgctggt
tttcttcatgatatggggaaagctattgacaaagaggtcgaaggtagtcacgttgagatt
ggtactgagtttgcacgtaagtataaagagcatccagtcgtggttaatgccattgccagc
caccatggagatgtggaacctgagagtgtgattgcagttattgtagctgcagcagatgct
ttgagttcggctcgcccaggagctcgtaatgaatccgttgagaattatgtcaaacgcctt
cgtgatttggaagagattgcatcaagctttgacggtgttcaaacaagcttcgcccttcaa
gctggtcgtgaaattcgtattatggttcatccaaataaaatctcagatgatgaagttacg
atcttgtctcacaagatacgtgaacaaattgagaaaaacttggattacccaggaaatatt
aaggttacagtcattcgtgaattccgtgcggttgactatgccaaataa
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