Sphaerobacter thermophilus: Sthe_0796
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Entry
Sthe_0796 CDS
T01128
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
sti
Sphaerobacter thermophilus
Pathway
sti03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Sthe_0796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sti03400
]
Sthe_0796
DNA repair and recombination proteins [BR:
sti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sthe_0796
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Sthe_0796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
AAA_22
UB2H
Kinesin
AAA_16
SWI2_SNF2
DUF6809
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
ACZ38233
UniProt:
D1C1W6
LinkDB
All DBs
Position
1:complement(880568..882562)
Genome browser
AA seq
664 aa
AA seq
DB search
MPEFQLVTDLRPTGDQPKAIAQLVEGLQRGYDQQTLLGVTGSGKTFTMANVIQAVQRPTL
VLAPNKTLAAQLYSEFKEFFPHNAVEYFVSYYDYYQPEAYVPRTDTYIEKDADINDEIDK
LRHAATRALLTRRDVIIVASVSCIYGIGSPEEYGKTIVSLRRGATVRRDKVLRHLVELQY
ERNDLTLMRGTFRVRGDTLDIFPAYEEIAVRIEFWGDEIERIVDIDPLTGEILAERNEID
IYPAKHFVTSQEKLQRAIKSIQEELEEWLKHLEAEGKILEAARLKQRTLYDLEMLQEAGY
CSGIENYSRHLSGRKEGEPPWTLLDYFPDDYLMFIDESHMSIPQVRGMYGGDRSRKDILV
EFGFRLPSARDNRPLTFDEFMQHINQVIYVSATPGEFELQNSKQVVEQVIRPTGLLDPEI
SVRPTKGQIDDLIDEIHRRVARGERALVTTLTKKMAEDLADYLKEIGIRTHYLHSEIDTL
ERIEILRDLRLGVYDVVVGINLLREGLDLPEVSLVAILDADKEGYLRSESSLIQTIGRAA
RHVDGKVIMYADTITRSMEAAINETYRRRAIQIAYNEEHGIEPRGIVKEVRDLTDRVRAV
AEEASPYRAESKAGAIAELPPDELVRMIKDLERQMKEAAKMLEFEKAALLRDQIIELRRI
QEVV
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattccaactagtcaccgatctccgaccgaccggcgaccagccgaaggccatc
gcccaactggtcgaggggctccagcgcggctacgaccagcagaccttgctcggtgtgacc
ggctcgggcaagacgttcaccatggccaacgtgatccaggcagtccaacgcccgactctg
gtcctcgcgcccaacaagaccctggccgcgcagctctacagcgagttcaaggagttcttt
ccgcacaacgcagtcgagtacttcgtcagctactacgactactaccagccggaggcctac
gtcccgcggaccgacacctacatcgagaaggacgcggacatcaacgacgagattgacaag
ctgcgccacgctgcgacgcgggcactgctgacccggcgagacgtcatcatcgtcgccagc
gtctcctgcatctacggcatcggctcacccgaggagtacgggaagacgatcgtctccctg
cgccgcggcgccaccgtccggcgcgacaaggtgctgcgccatctggtcgaactccagtac
gagcgcaacgacctgaccctgatgcgcggcaccttccgcgtgcgcggcgacacgctcgac
atcttcccggcgtacgaggagatcgcggtccggatcgagttctggggcgacgagatcgag
cgcatcgtcgacatcgacccgctcaccggtgagatcctggccgagcgcaacgagatcgac
atctaccccgccaagcacttcgtcaccagccaggagaagctccagcgcgctatcaagagc
atccaggaagagctggaggagtggctcaagcacctggaggcggaggggaagatcctggag
gcggcgcgcctcaagcagcgcaccctgtacgacctggagatgctgcaggaagccggctac
tgctcgggcatcgagaactactcccggcacctctccggtcgcaaggaaggcgagccgccc
tggacgctgctcgattacttcccggacgactatctgatgttcatcgacgagtcccacatg
tcgatcccgcaggtccgggggatgtacggcggtgaccgctcgcgcaaggacatcctcgtc
gagttcggcttccgcctgccgtcggcgcgggacaaccggccgctgaccttcgacgagttc
atgcagcacatcaaccaggtgatctacgtctcggcgacgcccggcgaattcgagctgcag
aacagcaagcaggttgtcgagcaggtcatccggccgacgggcctgttggacccggagatc
agcgtccggccgaccaagggccagatcgatgacctcatcgacgagatccaccgtcgcgtg
gcgcgcggtgagcgagcgctggtcacgaccctgaccaagaagatggcggaggatctggcc
gactacctcaaggagatcggcatccgcacacactacctgcacagcgaaatcgacacgctg
gagcggattgagatccttcgcgacttgcggctcggcgtctacgacgtggtggtggggatc
aacctgttgcgggagggtctggacctgcccgaggtgtcgctggtcgccatcctcgacgcc
gacaaggagggctacctgcgctccgagagttcgctcatccagacgatcggccgggcggcc
cgccatgtcgacggcaaggtcatcatgtacgccgacaccatcacccggtcgatggaggcc
gcgatcaacgagacctaccggcgccgcgccatccagatcgcttacaatgaggagcacggc
atcgagccgcgcggcatcgtcaaggaggtccgcgacctgactgaccgcgtgcgcgcggtg
gccgaagaggcgagcccctatcgggccgagtcgaaggccggggctatcgccgagttgccg
cccgacgagctggtgcggatgatcaaggacctggagcggcagatgaaggaagcggccaag
atgctcgagttcgagaaggccgcactgctccgggaccagatcatcgagttgcgacgcatc
caggaagtcgtctga
DBGET
integrated database retrieval system
