KEGG   Streptococcus salivarius JIM8777: SALIVA_1568Help
Entry
SALIVA_1568       CDS       T02089                                 

Gene name
gyrB
Definition
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
stj  Streptococcus salivarius JIM8777
Brite
KEGG Orthology (KO) [BR:stj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:stj03032]
    SALIVA_1568 (gyrB)
   03400 DNA repair and recombination proteins [BR:stj03400]
    SALIVA_1568 (gyrB)
Enzymes [BR:stj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     SALIVA_1568 (gyrB)
DNA replication proteins [BR:stj03032]
 Prokaryotic type
  DNA Topoisomerases
   SALIVA_1568 (gyrB)
DNA repair and recombination proteins [BR:stj03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      SALIVA_1568 (gyrB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_3 RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID: CCB95876
LinkDB All DBs
Position
complement(1718312..1720264)
Genome map
AA seq 650 aa AA seqDB search
MTDELKNIEEKAQEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEA
LAGFATHIQVFIEPDNSITVVDDGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKV
SGGLHGVGSSVVNALSTQLDVKVYKNGHIHFQEYKRGVVVADLAVIGETEKHGTTVHFTP
DPEIFQETTEFDFGKLAKRIQELAFLNKGLRISITDKREGLEQEKHYHYEGGITSYVKYI
NENKDVIFDEPIYTDGEMDGISVEVAMQYTTGYHETVMSFANNIHTHEGGTHEQGFRTAL
TRVINDYARQNKILKEKDDNLTGDDVREGLTAIISVKHPNPQFEGQTKTKLGNSEVVKIT
NRLFSEALSRFLLENPAIAKKIVEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLAD
CSSNNAEMNELFIVEGDSAGGSAKSGRNREFQAILPIRGKILNVEKASMDKILANEEIRS
LFTAMGTGFGAEFDVSKARYHKLVIMTDADVDGAHIRTLLLTLIYRFMRPVLEAGYVYIA
QPPIYGVKVGSEIKEYIQPGADQEDKLRAALEKYSVGRSKPTVQRYKGLGEMDDHQLWET
TMDPENRLMARVSVDDAAEADKIFDMLMGDKVEPRREFIEENAVYSTLDI
NT seq 1953 nt NT seq  +upstreamnt  +downstreamnt
atgactgatgaattaaaaaatattgaagaaaaagcgcaagaatatgatgccagccagatt
caagtcctagaggggcttgaagcggtacgtatgcgcccaggtatgtatattggatcaacc
tcaaaagaagggttgcatcatttggtatgggagattgtcgataactcaatcgatgaggcc
ttggctggtttcgccactcatattcaggtttttattgagccggacaattctatcacggtt
gtcgatgatggtcgtggtattccagtcgatatccaagaaaaaactggtcgtcctgcagtt
gaaactgtctttacggtacttcacgctggtggtaaattcggcggaggcggttataaggtc
tctggtggtttgcacggggttggttcttcggtcgttaatgccctctcaacacaacttgat
gttaaggtttataaaaatggccatatccacttccaagagtataaacgtggggtcgtggta
gcagatttggcagtaattggtgaaacagagaaacatggtacgactgttcactttacgcca
gacccagagattttccaagagacaaccgagtttgattttggaaaattggctaaacgtatc
caagagctagcctttttgaataaggggctccgtatctctatcacagataagcgtgagggt
ctcgaacaagagaaacactatcactacgaaggtggtatcacgtcttatgtgaaatacatc
aatgaaaacaaggatgttatctttgacgaacctatctacactgatggtgaaatggatggt
atttcggttgaagttgctatgcaatatacaactggctatcatgaaacagtgatgagtttt
gcaaacaacattcacacccatgaaggtggtactcacgaacaaggtttccgtacagcctta
acgcgtgtcattaatgactatgcacgtcagaataagattctcaaagaaaaagatgataat
ttgactggggatgatgttcgtgaagggttgactgctatcatctctgtcaagcatccaaac
ccacagtttgaaggtcaaaccaagaccaagcttggaaactctgaagtagttaagattacc
aatcgtctcttcagtgaagctttgagtcgcttcctcttggaaaatcctgccattgctaag
aagattgttgaaaaagggattttggcttctaaggctcgtatcgccgctaaacgtgcccgt
gaagtgacacgtaagaagtcaggtcttgaaatttctaaccttccagggaagttggcagac
tgttcatcaaataatgccgaaatgaatgaacttttcattgtcgaaggggactcagctggt
ggttctgctaagtcaggacgtaaccgtgaattccaagccattctgccaattcgaggtaag
attttgaacgttgaaaaggctagcatggataagattctagccaatgaagaaattcgttct
ctcttcacagctatgggaacaggttttggagctgaatttgatgtcagcaaggctcgttac
cacaagttggtaatcatgaccgatgccgatgtcgatggggctcacatccgtaccttgctt
ctgactttgatttaccgctttatgcgtccagtcttggaagcaggctatgtctacattgca
caacctccaatttatggggttaaggttggttctgagattaaagaatacatccaacctggt
gccgatcaagaagacaaattgcgtgctgctcttgaaaagtatagtgtgggacgttcaaaa
cctacggtacaacgttataaaggtttaggtgaaatggatgaccaccaactttgggaaaca
accatggaccctgaaaatcgtttgatggcacgtgtttctgtggatgatgctgcagaagca
gataagattttcgatatgctgatgggagacaaggttgaacctcgccgcgaatttatcgaa
gaaaatgccgtttacagtactctagatatctaa

DBGET integrated database retrieval system