Streptococcus thermophilus LMG 18311: stu0002
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Entry
stu0002 CDS
T00213
Symbol
dnaN
Name
(GenBank) beta subunit of DNA polymerase III
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
stl
Streptococcus thermophilus LMG 18311
Pathway
stl03030
DNA replication
stl03430
Mismatch repair
stl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
stu0002 (dnaN)
03430 Mismatch repair
stu0002 (dnaN)
03440 Homologous recombination
stu0002 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stl03032
]
stu0002 (dnaN)
03400 DNA repair and recombination proteins [BR:
stl03400
]
stu0002 (dnaN)
Enzymes [BR:
stl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
stu0002 (dnaN)
DNA replication proteins [BR:
stl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
stu0002 (dnaN)
DNA repair and recombination proteins [BR:
stl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
stu0002 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
IF-2
Motif
Other DBs
NCBI-ProteinID:
AAV59732
UniProt:
Q5M6L7
LinkDB
All DBs
Position
1705..2841
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AA seq
378 aa
AA seq
DB search
MIQFAINKAYFLQALHTTRRAISSKNAIPILSTIKIEVTSDGIYLTGSNGQISIENSISA
SEENAGLLITQPGSILLEANFFINVVSSLPDVTLTFEEIEQYQVLLKSAKTEITLKGKDA
EQYPRIQEVDSLTPLIMDTKMLKSIIAETSFAASTQESRPILTGVHFVLSNHKDLKAVAT
DSHRMSQRQLVLEHSADNFDVVIPSRSLKELSAVFSDGIENLEIFFSANQILFRSETISF
YTRLLEGNYPDTNRLLSDSFETEVVFETSTLRSAMERSYLISNASQSGTVKLEIINGNVS
AHVNSPEVGKVNEDIDVLDVSGSDLIISFNPTYLIDALKALKSESVRIRFISPVRPFTLT
PADDSENFIQLITPVRTN
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgattcaatttgctattaataaagcttatttcctacaagcccttcatacaactcgacgt
gctatttcttcaaaaaatgctattcccattctatcaactataaaaatcgaagttactagt
gatggtatctatttaactggctcaaatggacaaatctcgatagagaatagcatctctgct
tcagaagaaaatgcaggtttattaattacacaaccaggtagtatccttttagaagcgaat
tttttcatcaacgttgtttcaagcttacctgatgttactcttacatttgaagaaatagaa
caataccaagtattactaaagagtgctaaaacagagattactctaaaaggaaaggatgct
gagcaatatcctcgtattcaagaagttgacagcttgacaccactaattatggacactaaa
atgttaaaatctatcattgctgaaacgtcatttgcagcaagcacgcaagaaagtcgtcca
attttaactggagttcactttgttctttcaaatcacaaagatcttaaagctgttgccact
gattctcatcgtatgagccaacgtcaacttgttttggaacattctgcagataactttgat
gtagtaatcccaagccgatcacttaaagagttatcagcagtctttagtgatggtattgaa
aatttggaaattttcttctctgcaaatcaaattctattccgtagtgagacaatctctttt
tacacacgtttactagaaggaaattatccagatactaatcgtctcttgtcagattcattt
gaaacagaggttgtgtttgaaacatctacccttcgttctgctatggaacgttcctatttg
atttcaaatgcaagtcaaagtggcacggtgaaactcgaaatcatcaatggtaatgttagt
gctcatgttaattcacctgaagtcggaaaggtgaatgaagatattgatgtgctagacgtt
tcaggaagtgatttgattattagttttaatcccacttacttgatagacgctttgaaagca
ctaaaaagtgagtcagttcgtattcgtttcatttctccagtacgcccattcactttgaca
ccagcagatgacagtgaaaactttattcaattaattacacctgtaagaacaaactaa
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