Streptococcus thermophilus ND03: STND_0123
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Entry
STND_0123 CDS
T01978
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
stn
Streptococcus thermophilus ND03
Brite
KEGG Orthology (KO) [BR:
stn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stn03016
]
STND_0123
Enzymes [BR:
stn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
STND_0123
Transfer RNA biogenesis [BR:
stn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
STND_0123
Prokaryotic type
STND_0123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
ADQ62197
LinkDB
All DBs
Position
131976..132722
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AA seq
248 aa
AA seq
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MVRYKATISYDGTLFSGFQRQPNARSIQEEIEKTLLRLNSGTPVTVHGAGRTDAGVHAYG
QVIHFDLSQERDPEKLRFGLDTQCPDDIDIVSIELVSEEFHARYSKHIKTYEFLVDAGRP
KNPMMRNYAIHYPYPLSLALMQEAAMELVGTHDFTGFTASGTSVENKVRTITQASVSIDE
KTGFYVFAFSGNGFLYKQVRNMVGTLLKIGNGRMPVSQAKTVLESRDRNLAGPTVAGNGL
YLKEIRYE
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggttagatataaagcgacaatttcttatgatgggacacttttttcaggttttcaaagg
caaccaaatgctcgttctattcaagaagagattgaaaagactcttttgcggctaaatagt
ggtactcctgtaactgtacacggggcaggccgaacagatgctggtgttcatgcttatgga
caggttatccactttgatttatctcaggagagggatccagagaagctgcgttttggttta
gatacacagtgtccagatgatattgacattgttagtatcgagcttgtatcggaggaattc
catgcacgttatagtaaacatattaaaacctatgaattcctagtagatgcagggcgacct
aagaaccccatgatgcgtaattatgctatccactatccctaccctctaagtctagctctt
atgcaagaggctgctatggaattggtcggcacacatgattttacaggcttcacagcttca
gggacatctgtagaaaataaagtgcgtacaattacccaggcaagtgtatctatcgatgag
aaaactgggttttatgtctttgctttttctgggaatggctttctttataagcaagttaga
aatatggttggaacattattgaaaattggaaatggacgcatgccagtttcacaagcgaag
accgtgttggaaagtcgtgaccgcaatcttgcgggaccaaccgtagcaggtaatggttta
tatttgaaggagatacgatatgagtga
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