Salinispora tropica: Strop_0822
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Entry
Strop_0822 CDS
T00504
Name
(GenBank) ABC transporter, transmembrane region, type 1
KO
K16012
ATP-binding cassette, subfamily C, bacterial CydC
Organism
stp
Salinispora tropica
Pathway
stp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
stp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Strop_0822
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stp02000
]
Strop_0822
Transporters [BR:
stp02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
Strop_0822
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_16
ABC_membrane
AAA_21
AAA_29
AAA_25
MMR_HSR1
RsgA_GTPase
DUF87
SbcC_Walker_B
Zeta_toxin
AAA_22
AAA_33
AAA_24
Motif
Other DBs
NCBI-ProteinID:
ABP53299
UniProt:
A4X349
LinkDB
All DBs
Position
complement(915480..917315)
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AA seq
611 aa
AA seq
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MSVSDPASYPDTLPADIIDGNAAPVTTGRSGAPERVVLRLARPYLNRLLGAGLLAAATEF
AALALMSTATWLLMSAAGRPPLDRLTVAIVAVRALAIGRGVLRYTERLAGHDAVLRLVTD
VRTRVFAALAARRDSAGQRSGDALSRLVSDVEAVQDLLLRVLVPATAAGLVSVVAVAATM
VVSPAAAGTLAVGLLFAGVALPVLATVLTRRAAAELAPLRGALATDAVDLTHGAADLAAF
GATDRARGAATGRIQRLARIERRLAAAGFAVDALGVLVAGLTAGAVLLVALADGVAGVLV
GVLAVGTLVAVEVALALVGAARQWTGLRAGLTRVAALLREAPAVTAATPPPGPAPTAVEI
RFSDVTVRYRSAGPPALDRFRLDLPPGRRVAVVGPSGAGKSTLAAVLTGSVRPAAGRIVL
DGQDLSAYPAELLPRFVGGLLAEAYVFHATVRENLLLGRPGAPEEDLNAATAAAGLARWV
REQPDGWDTVVGEEGGQLSGGQRQRLALARALLAEPAVLVLDEPTEGLDPVAADDVLASV
LAATPAQRSVLLISHRLRGLDAVDEILVLESGRVVQRGRHADLVATPGWYRDQWQLQEVA
ERGYLALGPLP
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgtccgacccggccagctacccggacactctcccggccgacatcatcgacggc
aacgcggcgccggtgaccaccgggcgctccggcgcgccggagcgggtggtgctgcggttg
gcccgcccctacctgaaccggctgctcggggcgggcctgctcgccgccgccaccgagttc
gccgcgctggccctgatgtccaccgcgacgtggctgctgatgagcgccgccggccgcccg
ccgttggaccggctgacggtggcgatcgtcgccgtccgtgcgctcgccatcgggcgcggc
gtcctccgctacaccgagcgcctggccgggcacgacgcggtgctgcggctggtcaccgat
gtccgtacccgggtcttcgccgccctggcggcccgccgggacagcgcggggcagcgctcc
ggtgacgcactgagccggctggtctccgacgtggaagccgtccaggacctgctgctacgg
gtcctcgttccggcaacggcagcggggctggtgagcgtagtggccgtcgccgcgacgatg
gttgtctcaccggccgccgccggaacgctcgcggttggactgctgtttgcgggggtcgcg
ctgccggtactggccaccgtgctgacccgacgcgccgccgccgaactggcaccgctacgc
ggcgccctggccaccgatgccgtcgacctcacccacggcgctgccgacctcgccgccttc
ggggccaccgatcgggcccggggcgcggcaaccggccggatccagcggctggcccgcatc
gagcggcggctggccgcggccggcttcgcagtggacgcgctgggtgtcctggtggccggg
ctgaccgccggggcggtactactggtggccctggccgacggcgtagccggggtgctggtc
ggcgtcctcgccgtcggcacgctggtcgccgtcgaggtcgcgctcgccctcgtcggcgcc
gcccggcagtggaccggcctccgcgccggcctcacccgggtcgccgcgctgctccgggag
gcgccggcagtaaccgcggccacacccccgccgggccccgcccccaccgccgtggagatc
cggttcagcgatgtcaccgtccgctaccgcagcgcgggaccgcccgccctcgaccggttc
cgcctggacctaccccccggccggcgggtcgccgtggtggggccgagcggcgccgggaag
agcaccctcgccgccgtcctcaccggcagcgtacggccggcagccggacgaatcgtcctg
gacggacaggatctgtccgcctacccggcggaactcctcccccgcttcgtcgggggccta
ctcgccgaggcgtacgtcttccacgccacggtccgggagaacctgttgctcgggcgcccc
ggggcgcccgaggaggacctgaacgcggcgaccgccgctgctgggctggcccgttgggta
cgggagcagcctgacggctgggacacggtggtgggtgaagagggcgggcagctctccggc
ggccagcgacagcgtctcgcgctggcccgggcgctgctcgccgagccggcggtactcgtg
ctcgacgagccgaccgaagggctcgatccggtggccgcggacgacgtcctggcgtccgtg
ctggccgccaccccggcccaacgctccgtgctgctgatcagccaccggctgcgcggcctc
gacgcggttgacgagatcctggtgctcgagtctggtcgggtggtccagcgcggccggcac
gccgacctggtcgcgacccccggctggtaccgggatcagtggcagctccaggaggttgcc
gagcgcggctatctcgctctcggcccgctgccctga
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