KEGG   Streptomyces sp. CNQ-509: AA958_07435Help
Entry
AA958_07435       CDS       T03968                                 

Definition
(GenBank) hypothetical protein
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
strc  Streptomyces sp. CNQ-509
Pathway
strc03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:strc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    AA958_07435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:strc03400]
    AA958_07435
Enzymes [BR:strc01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     AA958_07435
DNA repair and recombination proteins [BR:strc03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     AA958_07435
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C RNA_ligase
Motif
Other DBs
NCBI-ProteinID: AKH82089
UniProt: A0A0F7N3Y2
LinkDB All DBs
Position
1789706..1790710
Genome map
AA seq 334 aa AA seqDB search
MTDPGGLPHVPPMLAVSGSLPTAAADPSWAYELKWDGIRAVAYAPGDGSLTLRTRNDNDV
TVRYPELAPLGEALAAAGHACVLDGEIVALGADGRPSFGALQRRMNLTRGAVIARLATEV
PVDYMAFDVLYLDGESTLRLPYRARRALLTDLRVEGPHWRTPPHWEGHGTEAWEMTRRYG
LEGLLAKRLESPYLPGRRSGLWLKIKNVRTQEVVVGGWTEGAGSRSDAVGGLLMGVWTEA
GELAYAGTVGSGFSRHALEVLRERLAGLARDTSPFSGPVADRHVRAGGAVHWVEPELVGE
VTYGEWTATGVLRHPVWRGLRPDKGPEEARRPEA
NT seq 1005 nt NT seq  +upstreamnt  +downstreamnt
atgaccgaccccggcgggctgccgcacgtcccgcccatgctggcggtctccggcagcctg
ccgacggccgccgcggacccctcgtgggcgtacgagctgaagtgggacggcatccgcgcc
gtcgcgtacgccccgggcgacggctcgctcacgctgcgcacccgcaacgacaacgacgtc
accgtccgctaccccgagctggccccgctcggtgaggccctcgccgccgccgggcacgcc
tgcgtgctcgacggcgagatcgtcgcgctgggcgccgacggccgcccctccttcggcgcg
ctccagcgccgcatgaacctcacccgcggcgccgtcatcgcccgcctcgcgaccgaggtg
ccggtcgactacatggcgttcgacgtgctgtacctcgacggcgagtccaccctgcgcctc
ccgtaccgcgcacgccgcgcgctcctcacggacctgcgcgtcgaaggaccgcactggcgc
acgcccccgcactgggagggccacggcaccgaggcgtgggagatgaccaggcggtacggg
ctggaggggctgctcgcgaagcggctggagtcgccgtatctgccggggcggcgcagcggt
ctctggctgaagatcaagaacgtccgcacccaggaggtcgtcgtcgggggctggacggag
ggcgcgggcagcaggtcggacgcggtcggcgggttgctgatgggtgtctggacggaggcc
ggcgagctggcctacgcggggacggtgggcagcggcttctcccggcacgcgctggaggtg
ctgcgggagcggctggcggggctggcccgggacacgagcccgttctccggcccggtcgcg
gaccggcacgtgcgggcgggcggcgcggtgcactgggtggagccggaactggtgggggag
gtcacgtacggggagtggacggcgacgggcgtcctgcggcatccggtgtggcgggggctg
cggccggacaagggcccggaggaggcgcggcggccggaggcgtag

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