KEGG   Streptomyces sp. CNQ-509: AA958_26430
Entry
AA958_26430       CDS       T03968                                 
Name
(GenBank) ribonuclease
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
strc  Streptomyces sp. CNQ-509
Pathway
strc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:strc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AA958_26430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:strc03019]
    AA958_26430
Messenger RNA biogenesis [BR:strc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AA958_26430
SSDB
Motif
Pfam: RNase_J_C RMMBL Lactamase_B Lactamase_B_2
Other DBs
NCBI-ProteinID: AKH85180
UniProt: A0A0F7N9G0
LinkDB
Position
6127220..6128905
AA seq 561 aa
MSHPHPELGPPPALAEGALRVTPLGGLGEIGRNMTVFEYGGRLLIVDCGVLFPEEEQPGV
DLILPDFSTIRDRLDDIEGIVLTHGHEDHIGAVPYLLREKADIPLIGSKLTLALIEAKLQ
EHRIRPYTLQVAEGGRERIGPFDCEFVSVNHSIPDSLAVAVRTPAGVVVHTGDFKMDQLP
LDGRLTDLPAFARLGEEGIDLLLVDSTNAEVPGFVAPEKDISGVLRGVFAAAQRRIIVAS
FASHVHRIQQVLDAAHGYGRKVAFVGRSMVRNMGIARDLGYLRVPAGLVVDVKTLDDLPD
REVVLVCTGSQGEPMAALSRMANRDHQIRIVAGDTVILASSLIPGNENAVYRVINGLTRW
GANVVHKGNAKVHVSGHASAGELLYFYNICKPRNVMPVHGEWRHLRANAELAAATGVRAD
RIVIAEDGVAVDLVDGVAKISGKVQAGYVYVDGLSVGDVTESSLKDRRILGEEGIISVFV
VVDSTTGKIVGGPHVQSRGSGIEDGAFRDVIPKLEEALAKSASDGVAETHQLQQLVRRTV
GKWVSDTFRRRPMILPVVVEV
NT seq 1686 nt   +upstreamnt  +downstreamnt
ttgagccatccccatcccgaactcggcccaccccccgcactcgcggagggcgccctgcgc
gtcacgccgctcggcggactcggcgagatcggccgcaacatgaccgtcttcgagtacggc
ggccgcctgctgatcgtcgactgcggcgtcctcttccccgaagaggagcagcccggggtc
gacctgatccttcccgacttctccaccatcagggaccgcctcgacgacatcgagggcatc
gtcctcacgcacggccacgaggaccacatcggcgccgtgccgtacctgctccgcgagaag
gcggacattcccctgatcggctccaagctgaccctcgccctcatcgaggccaagctccag
gagcaccgcatccgcccgtacaccctccaggtcgccgagggcggcagggagcgcatcggg
cccttcgactgcgagttcgtctccgtcaaccactccatcccggacagcctggccgtcgcc
gtccgcacccccgcgggcgtcgtcgtgcacaccggcgacttcaagatggaccaactaccc
ctcgacggccgcctcaccgacctgcccgcgttcgcgcgcctcggcgaggagggcatcgac
ctgctgctggtggactccaccaacgccgaggtcccggggttcgtggccccggagaaggac
atctccggcgtgctgcgcggggtgttcgcggcggcgcagcgaaggatcatcgtcgcgagc
ttcgcgagccatgtgcaccgcatccagcaggtcctggacgcggcgcacgggtacggcagg
aaggtcgccttcgtcggccgctccatggtccgcaacatgggcatcgcccgcgacctcggc
tacctgcgcgtgcccgcgggactcgtcgtcgacgtgaagaccctcgacgacctgccggac
cgcgaggtcgtcttggtctgtacgggctcgcagggcgagccgatggccgccctgtcccgg
atggccaaccgtgaccaccagatccgcatcgtcgccggcgacaccgtcatcctcgcctcg
tccctgatccccgggaacgagaacgcggtctaccgcgtgatcaacggcctcacccgctgg
ggcgccaacgtcgtccacaagggcaacgccaaggtccacgtctcgggccacgcctcggcc
ggcgaactgctgtacttctacaacatctgcaaaccccgcaacgtcatgccggtccacgga
gaatggcgccacttgcgcgccaacgccgaactcgcggcggcgacgggcgtccgcgcggac
cgcatcgtcatcgcggaggacggcgtggccgtcgacctggtcgacggggtcgccaagatc
tccggcaaggtccaggcgggatacgtgtacgtcgacggcctctccgtcggcgacgtgacg
gagtcctcgctcaaggaccgccgcatcctcggcgaggagggcatcatcagcgtcttcgtc
gtggtggacagcaccacggggaagatcgtgggcggcccccacgtccagagccgcggttcc
ggcatcgaggacggggcgttccgggacgtcatcccgaagctggaggaggccctcgccaag
tccgcctcggacggcgtcgccgagacgcaccagctccagcagttggtccggcgcacggtg
ggcaagtgggtctccgacaccttccgccgccgcccgatgatcctcccggtcgtcgtcgag
gtctga

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