Streptomyces sp. CNQ-509: AA958_26430
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Entry
AA958_26430 CDS
T03968
Name
(GenBank) ribonuclease
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
strc
Streptomyces sp. CNQ-509
Pathway
strc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
strc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AA958_26430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
strc03019
]
AA958_26430
Messenger RNA biogenesis [BR:
strc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AA958_26430
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Motif
Other DBs
NCBI-ProteinID:
AKH85180
UniProt:
A0A0F7N9G0
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Position
6127220..6128905
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AA seq
561 aa
AA seq
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MSHPHPELGPPPALAEGALRVTPLGGLGEIGRNMTVFEYGGRLLIVDCGVLFPEEEQPGV
DLILPDFSTIRDRLDDIEGIVLTHGHEDHIGAVPYLLREKADIPLIGSKLTLALIEAKLQ
EHRIRPYTLQVAEGGRERIGPFDCEFVSVNHSIPDSLAVAVRTPAGVVVHTGDFKMDQLP
LDGRLTDLPAFARLGEEGIDLLLVDSTNAEVPGFVAPEKDISGVLRGVFAAAQRRIIVAS
FASHVHRIQQVLDAAHGYGRKVAFVGRSMVRNMGIARDLGYLRVPAGLVVDVKTLDDLPD
REVVLVCTGSQGEPMAALSRMANRDHQIRIVAGDTVILASSLIPGNENAVYRVINGLTRW
GANVVHKGNAKVHVSGHASAGELLYFYNICKPRNVMPVHGEWRHLRANAELAAATGVRAD
RIVIAEDGVAVDLVDGVAKISGKVQAGYVYVDGLSVGDVTESSLKDRRILGEEGIISVFV
VVDSTTGKIVGGPHVQSRGSGIEDGAFRDVIPKLEEALAKSASDGVAETHQLQQLVRRTV
GKWVSDTFRRRPMILPVVVEV
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
ttgagccatccccatcccgaactcggcccaccccccgcactcgcggagggcgccctgcgc
gtcacgccgctcggcggactcggcgagatcggccgcaacatgaccgtcttcgagtacggc
ggccgcctgctgatcgtcgactgcggcgtcctcttccccgaagaggagcagcccggggtc
gacctgatccttcccgacttctccaccatcagggaccgcctcgacgacatcgagggcatc
gtcctcacgcacggccacgaggaccacatcggcgccgtgccgtacctgctccgcgagaag
gcggacattcccctgatcggctccaagctgaccctcgccctcatcgaggccaagctccag
gagcaccgcatccgcccgtacaccctccaggtcgccgagggcggcagggagcgcatcggg
cccttcgactgcgagttcgtctccgtcaaccactccatcccggacagcctggccgtcgcc
gtccgcacccccgcgggcgtcgtcgtgcacaccggcgacttcaagatggaccaactaccc
ctcgacggccgcctcaccgacctgcccgcgttcgcgcgcctcggcgaggagggcatcgac
ctgctgctggtggactccaccaacgccgaggtcccggggttcgtggccccggagaaggac
atctccggcgtgctgcgcggggtgttcgcggcggcgcagcgaaggatcatcgtcgcgagc
ttcgcgagccatgtgcaccgcatccagcaggtcctggacgcggcgcacgggtacggcagg
aaggtcgccttcgtcggccgctccatggtccgcaacatgggcatcgcccgcgacctcggc
tacctgcgcgtgcccgcgggactcgtcgtcgacgtgaagaccctcgacgacctgccggac
cgcgaggtcgtcttggtctgtacgggctcgcagggcgagccgatggccgccctgtcccgg
atggccaaccgtgaccaccagatccgcatcgtcgccggcgacaccgtcatcctcgcctcg
tccctgatccccgggaacgagaacgcggtctaccgcgtgatcaacggcctcacccgctgg
ggcgccaacgtcgtccacaagggcaacgccaaggtccacgtctcgggccacgcctcggcc
ggcgaactgctgtacttctacaacatctgcaaaccccgcaacgtcatgccggtccacgga
gaatggcgccacttgcgcgccaacgccgaactcgcggcggcgacgggcgtccgcgcggac
cgcatcgtcatcgcggaggacggcgtggccgtcgacctggtcgacggggtcgccaagatc
tccggcaaggtccaggcgggatacgtgtacgtcgacggcctctccgtcggcgacgtgacg
gagtcctcgctcaaggaccgccgcatcctcggcgaggagggcatcatcagcgtcttcgtc
gtggtggacagcaccacggggaagatcgtgggcggcccccacgtccagagccgcggttcc
ggcatcgaggacggggcgttccgggacgtcatcccgaagctggaggaggccctcgccaag
tccgcctcggacggcgtcgccgagacgcaccagctccagcagttggtccggcgcacggtg
ggcaagtgggtctccgacaccttccgccgccgcccgatgatcctcccggtcgtcgtcgag
gtctga
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