KEGG   Streptomyces sp. 769: GZL_02561Help
Entry
GZL_02561         CDS       T03587                                 

Definition
(GenBank) putative ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
stre  Streptomyces sp. 769
Pathway
stre03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:stre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    GZL_02561
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:stre03400]
    GZL_02561
Enzymes [BR:stre01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     GZL_02561
DNA repair and recombination proteins [BR:stre03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     GZL_02561
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C DNA_ligase_OB_2
Motif
Other DBs
NCBI-ProteinID: AJC55152
UniProt: A0A0A8EI44
LinkDB All DBs
Position
2677049..2677981
Genome map
AA seq 310 aa AA seqDB search
MIRPMLAVLGPLPPEPEQPAWAFEAKWDGARCIVNVSDDGTVRLVTRAGNDVTTSYPELG
PLGRQLRGRPAVLDGEVVVLDPAGRPDFGLLQRRMGVLNPRRTARLAMELPVQLVLFDVM
YLGGPLLDAPYHERRAVLAGLGLAGPNWSVPGYVAGHGHQAWEAALRGGLEGVMAKRLSS
PYLPGLRSPDWVKTKYQETLDVVIGGWTEGHGALGGLPGSVLAGVQEPDGLRFVGAVGSG
LSDHERRELAGYLSMIPLDHSPFVNDVELAGVHWAEPRLVAEIAFSGWTSAGRLRHPVWH
RLRPDLTWLG
NT seq 933 nt NT seq  +upstreamnt  +downstreamnt
gtgatccggccgatgctggccgtgctcgggccgctgccgcccgagccggagcagccggcc
tgggcgttcgaggccaagtgggacggggcccgctgcatcgtcaacgtctccgacgacggc
accgtgcgactggtcacccgggccggcaacgacgtcaccacgagctatcccgaactgggc
ccgctcgggcggcaactgcgcggccggcccgcggtgctggacggcgaggtggtggtgctg
gaccccgccggccggcccgacttcgggctgctgcagcggcggatgggcgtgctcaacccg
cgccgcaccgcccggctggcgatggaactccccgttcagctggtgctcttcgacgtgatg
tacctgggcgggccgctgctggacgcgccgtaccacgagcggcgggcggtgctggccggg
ttggggctggccggacccaactggtcggtgccggggtacgtggcgggccacggccaccag
gcatgggaggcggcgctgcgcggtggtctggagggcgtgatggccaagcggctgtcctcg
ccgtacctccccgggctgcgctcacccgactgggtgaagaccaagtaccaggagacgctg
gacgtcgtcatcggcggctggaccgagggacacggggcgctcggcgggctgccggggtcg
gtgctggcgggtgtacaggagccggacgggctgcggttcgtgggcgccgtgggctcgggg
ctctccgaccacgagcggcgggagctggcgggctatctgagcatgatcccgctggaccac
tcgccgttcgtcaacgacgtggagctggcgggggtgcactgggcggagccgcggctggtg
gccgagatcgccttcagcgggtggacgtcggcgggccggctccggcatccggtctggcac
cgactgcggcccgacctgacctggctgggctga

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