Streptomyces sp. 4F: ASR50_13870
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Entry
ASR50_13870 CDS
T04265
Name
(GenBank) DNA mismatch repair protein Vsr
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
strf
Streptomyces sp. 4F
Brite
KEGG Orthology (KO) [BR:
strf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strf03400
]
ASR50_13870
DNA repair and recombination proteins [BR:
strf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
ASR50_13870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
DUF559
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
ALV50389
LinkDB
All DBs
Position
3130168..3130572
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AA seq
134 aa
AA seq
DB search
MSRQNRRDTAPEVAVRRILHAGGLRYRVNVPVPGMPRRTIDIVFPKAKVAVFLDGCFWHG
CPQHATSPKSNADWWRTKLDKNMARDAETTEHLTQEGWTVLRFWEHEPVDDVASRITATV
RPRRESNSHSTRAD
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgccagaaccgtcgcgacacggctcccgaggtggcggtccggcggattctgcac
gccggaggcctgcgctaccgggtgaacgtacccgtccccgggatgccccgccgcacgatc
gacatcgtcttccccaaggccaaggtggcggtgttcctcgacggctgcttctggcacggg
tgcccgcagcacgcgaccagccccaagtccaacgccgactggtggcgcaccaagctcgac
aagaacatggcccgcgacgccgagacgaccgagcatctgacccaggagggctggaccgtc
ctccgcttctgggagcacgaacccgtcgacgacgtggcctcccggatcaccgccacggtg
agaccgcgacgggagagcaacagccactcgacacgggcagattga
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