Streptomyces sp. PAMC 26508: F750_1976
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Entry
F750_1976 CDS
T02619
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
strp
Streptomyces sp. PAMC 26508
Pathway
strp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
strp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
F750_1976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strp03400
]
F750_1976
Enzymes [BR:
strp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
F750_1976
DNA repair and recombination proteins [BR:
strp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
F750_1976
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AGJ54471
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Position
2042699..2043562
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AA seq
287 aa
AA seq
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MRNPIGGHVPVAGGLAKVGLGHARALEAETVQVFVANPRGWATPPGNPAQDELFRSECAA
DSVPAYVHAPYLINFGSHTEATVERSVVSLRHSLRRAREIGALGVVVHTGSATGGRAREE
ALAQVRTHMLPLLDELTHDDDPFLLLESTAGQGSSLCSRTWDFGPYFEALDSHPKLGICL
DTCHIYAAGHDLTGPAGMRQTLDLLVDTVGEGRLKLIHANDSKDVAGAHKDRHENIGAGH
IGAEPFRELFRHPATEGVPLIIETPGGKDGHAADVARLKELRGTAAV
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacccgataggcggccacgttcccgtggccggcggactcgccaaggtcggtctc
ggccacgcccgggccctggaggcggagaccgtacaggtcttcgtcgccaacccgcgcggc
tgggcgacgccgcccgggaaccccgcccaggacgagctgttccgctccgagtgtgcggcg
gactcggttccggcgtacgtccacgccccgtatctgatcaacttcggttcgcacaccgag
gccaccgtcgagcggtcggtcgtctccctgcgccactcgctgcgccgggcgagggagatc
ggggccctgggtgtggtggtccacacgggctcggccaccggcgggcgtgcgcgcgaggag
gccctcgcccaggtgcggacgcacatgctcccgctgctggacgagctgacccatgacgac
gatccgttcctgctgctggagtcgaccgcggggcagggctcctcgctgtgctcacggacc
tgggacttcggcccgtacttcgaggccctggactcccatcccaagctggggatctgtctg
gacacctgccacatctacgcggcgggccacgacctgaccggtcccgcgggcatgcggcag
acgctggacctgctggtggacaccgtgggtgagggccggctgaagctgatccacgccaac
gactccaaggacgtggcgggcgcgcacaaggaccggcacgagaacatcggcgcgggtcat
atcggcgccgagccgttccgtgagctgttccggcaccccgcgaccgagggcgtgccgctg
atcatcgagacgcccggcggcaaggacggtcatgccgcggacgtggcacggctgaaggag
ctccggggcacggcggccgtctga
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