KEGG   Streptomyces qaidamensis: A4E84_22465
Entry
A4E84_22465       CDS       T04777                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
stsi  Streptomyces qaidamensis
Brite
KEGG Orthology (KO) [BR:stsi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:stsi03032]
    A4E84_22465
   03400 DNA repair and recombination proteins [BR:stsi03400]
    A4E84_22465
Enzymes [BR:stsi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     A4E84_22465
DNA replication proteins [BR:stsi03032]
 Prokaryotic type
  DNA Topoisomerases
   A4E84_22465
DNA repair and recombination proteins [BR:stsi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      A4E84_22465
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim HC2 Toprim_4 Toprim_2
Other DBs
NCBI-ProteinID: AMW12016
UniProt: A0A143C3D7
LinkDB
Position
5055402..5058230
AA seq 942 aa
MSPTSETAKGGRRLVIVESPAKAKTIKGYLGPGYIVEASVGHIRDLPNGAAEVPEKYTGE
VRRLGVDVEHDFQPIYVVNADKKAQVKKLKDLLKESDELFLATDEDREGEAIAWHLQEVL
KPKVPVKRMVFHEITKAAIQAAVANPRQLNQKLVDAQETRRILDRLYGYEVSPVLWKKVM
PRLSAGRVQSVATRLVVERERERIAFRSAEYWDLTGTFATGRAGDSSDPSSLVARLQTVD
GRRVAQGRDFDSLGQLKSANTLHLDEANARALAAALEQTRFAVRSVESKPYRRSPYAPFR
TTTLQQEASRKLGFGAKATMQVAQKLYENGYITYMRTDSTTLSDTAVAAARAQVTQLYGA
DYLPPQPRTYAGKVKNAQEAHEAIRPSGDRFRTPAETGLTGDQFKLYELIWKRTVASQMK
DATGNSVTVKIGGTAADGRDVEFSASGKTITFHGFLKAYVEGADDPNAELDDRERRLPQV
SEGDALSAQELTVDGHATKPPARYTEASLVKELEEREIGRPSTYASIIGTILDRGYVFKK
GTALVPSFLSFAVVNLLEKHFGRLVDYGFTAKMEDDLDRIARGEAQSVPWLKRFYFGEGT
ASGGAADAGNGDGDHLGGLKELVTDLGAIDAREVSSFPVANDIVLRVGRYGPYIERGEKD
TEQHQRADIPDDLAPDELTVDLAEELLAKPSGDYELGTDPATGHTIVAKDGRYGPYVTEI
LPEGTPKTGKNAVKPRTASLFKTMSLDTVTLDEALKLMSLPRVVGADAEGQEITAQNGRY
GPYLKKGTDSRSLQAEEQLFTITLEEALAIYAQPKQRGRAAAKPPLKELGTDPVSEKPVV
VKDGRFGPYVTDGETNATLRSGDSVEDITPERGYELLAEKRAKAPAKKTAKKAAKKAPAK
KTTTAKKTAAKKTTTAKKTTAKKTTAKKTAAKTATAAKSAED
NT seq 2829 nt   +upstreamnt  +downstreamnt
ttgtccccgaccagcgagaccgcgaagggcggccgccgactcgtcatcgtcgagtcgcct
gccaaggcgaagacgatcaagggctatctcggccccggctacatcgtcgaggcgagcgtc
gggcacatccgcgaccttcccaacggcgccgccgaggtgcccgagaagtacaccggcgag
gtccgccgcctcggtgtggacgtcgaacacgacttccagccgatctatgtggtcaacgcc
gacaagaaggcgcaggtcaagaagctcaaggacctgctgaaggagtccgacgaactcttc
ctcgccaccgatgaggaccgcgagggcgaggccatcgcctggcacctccaggaagttctc
aagcccaaggtcccggtcaagcggatggtcttccacgagatcaccaaggccgcgatccag
gccgccgtggccaacccgcgccagctcaaccagaagctcgtcgacgcccaggaaacccgc
cgcatcctcgaccgtctctacggctacgaggtctcgccggtcctgtggaagaaggtcatg
ccgcgcctgtcggccggccgtgtccagtcggtcgccacacgtctcgtggtggagcgggaa
cgcgagcgcatcgcctttcgttcggctgagtactgggacctgacgggtaccttcgcgacc
ggccgcgccggagactcgtcggacccgtcgtcgctggtcgcgcgcctgcagaccgtcgac
ggcaggcgggtcgcgcagggccgcgacttcgactccctgggacaactgaagagcgcgaac
accctccacctcgacgaggcgaacgcacgcgccctggccgccgccctggagcagacgcgg
ttcgccgtccgctccgtcgagtccaagccgtaccgccgctcgccgtacgccccgttccgt
acgacgacgctgcagcaggaagccagccgcaagctcggcttcggcgcgaaggccaccatg
caggtcgcgcagaagctgtacgagaacggctacatcacctacatgcgtacggactccacg
accctgagcgacacggcggtcgccgccgcccgcgcccaggtcacgcagctgtacggcgcc
gactacctgccgccgcagccgaggacgtacgccgggaaggtcaagaacgcgcaggaggcc
cacgaggcgatccgcccctcgggtgatcgtttccgcactcccgccgagacgggactgacc
ggtgaccagttcaagctgtacgagctgatctggaagcggaccgtcgcctcccagatgaag
gacgccaccggcaacagcgtcacggtgaagatcggcggcacggcggccgacggccgggac
gtcgagttcagcgcgtccggcaagacgatcaccttccacggcttcctgaaggcctacgtg
gagggcgccgacgacccgaacgcggagctcgacgaccgcgagcgccggctgccgcaggtc
tccgagggcgacgccctgagcgcccaggagctcacggtcgacgggcacgccaccaagccc
ccggcccgctacaccgaggcctccctggtcaaggagctggaagagcgcgagatcggccgc
ccgtcgacgtacgcgtcgatcatcggcacgatcctggaccgcggctacgtgttcaagaag
ggcacggccctggtgccgtcgttcctgtccttcgccgtcgtcaacctcctggagaagcac
ttcgggcggctcgtcgactacggcttcaccgccaagatggaggacgacctcgaccgcatc
gcccgcggcgaggcccagtccgtgccgtggctgaagcggttctacttcggcgagggcacc
gccagcggcggcgcggccgacgccggcaacggcgacggggaccacctcggcggcctcaag
gagctggtgacggacctgggcgcgatcgacgcccgcgaggtgtcgtcgttcccggtggcc
aacgacatcgtgctgcgggtcggccgctacgggccgtacatcgagcgcggcgagaaggac
accgagcagcaccagcgcgccgacatccccgacgacctggcgcccgacgagctgaccgtc
gacctcgcggaggagctgctcgccaagccgagcggcgactacgagctgggcacggacccg
gccaccggccacacgatcgtcgccaaggacggccgctacggcccgtacgtgacggagatc
cttcccgagggcaccccgaagacgggcaagaacgcggtcaagccgcgcacggcgtccctg
ttcaagacgatgtccctggacacggtgaccctcgacgaggccctcaagctgatgtcgttg
ccgcgtgtcgtcggcgcggacgccgagggccaggagatcaccgcgcagaacggccgctac
ggcccgtacctgaagaagggcacggactcgcgctcgctccaggccgaggagcagctcttc
acgatcacgctggaggaggcgctggcgatctacgcccagcccaagcagcgtggccgggcc
gcggccaagccgccgctgaaggagctgggcaccgacccggtcagcgagaagccggtcgtg
gtcaaggacggccgcttcggcccgtacgtcaccgacggggagaccaacgcgaccctgcgc
tccggcgacagcgtcgaggacatcaccccggagcgcggttacgagctgctcgccgagaag
cgggccaaggcgccggcgaagaagaccgcgaagaaggcggccaagaaggcgccggcgaag
aagacgacgacggccaagaagaccgcggcgaagaagaccacgaccgcgaagaagacgacg
gcgaagaagaccaccgcgaagaagacggccgccaagacggcgaccgccgccaagtccgcg
gaggactga

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