KEGG   Streptomyces qaidamensis: A4E84_27190Help
Entry
A4E84_27190       CDS       T04777                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
stsi  Streptomyces qaidamensis
Pathway
stsi03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:stsi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    A4E84_27190
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:stsi03400]
    A4E84_27190
Enzymes [BR:stsi01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     A4E84_27190
DNA repair and recombination proteins [BR:stsi03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     A4E84_27190
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Other DBs
NCBI-ProteinID: AMW12852
UniProt: A0A143C600
LinkDB All DBs
Position
complement(6091441..6092322)
Genome map
AA seq 293 aa AA seqDB search
MAPITVVEGRRLALSNLEKVLYPATGFTKGEVLHYYATVAGVLLPHLRDRAVSFLRYPDG
PDGQVFFTKNVPPGTPEWVTTAEVPRVEGPSRMVLVQDLPSLMWSANLVAEFHTHQWRVD
TPDEADRIVFDLDPGAPASIVQCCEVALWLRERLAADGIETYAKTSGSKGLHLLAPVRGA
SSERVSEYAKALAVEAEKAMPRLALHRMTRSLRPGKVFVDWSQNAARKTTATPYTLRARP
EPTVSAPVTWEEVEECRAPGRLDFHAVDIAPRVQDYGDLLAPLLDAEAAGTLP
NT seq 882 nt NT seq  +upstreamnt  +downstreamnt
atggcgcctatcacagtggtggaggggcgacggctcgctctcagcaatctggagaaggtg
ctgtatcccgccaccggcttcaccaagggcgaggtgctgcactactacgcgaccgtcgcc
ggggtcctgctgccccatctgcgtgaccgggcggtgtccttcctgcggtatccggacggt
ccggacgggcaggtgttcttcacgaagaacgtgccgccgggtacgcccgagtgggtcacc
accgccgaggtgccgcgggtcgaagggccctcgcggatggtcctggtgcaggatctgccg
agcctgatgtggtcggcgaacctcgtggccgagttccacacccaccagtggcgcgtcgac
accccggacgaggccgaccggatcgtgttcgacctcgatccaggggcgccggcgagcatc
gtgcagtgctgcgaggtcgcgctgtggctgcgggagcggctcgcggccgacggcatcgag
acctacgccaagacctccggctcgaaggggctgcatctgctggcccccgtacgaggggcg
tcctccgagcgggtgtccgagtacgccaaggcactcgccgtcgaggcggagaaggccatg
ccccgcctcgcgctgcaccggatgaccagaagcctgcgtccggggaaggtcttcgtcgac
tggagccagaacgccgcccgcaagacgacggcgacgccctacacgctccgggcccgcccc
gagccgaccgtctcggccccggtgacctgggaggaggtcgaggagtgccgggcacccggc
cgcctggacttccatgcggtcgacatcgccccgcgggtccaggactacggcgatctgctg
gctcccctgctggacgcggaggcggcggggacgctcccctag

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