Sphingobium fuliginis ATCC 27551: FIL70_08995
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Entry
FIL70_08995 CDS
T06343
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
3.6.4.13
]
Organism
sufl
Sphingobium fuliginis ATCC 27551
Pathway
sufl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sufl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FIL70_08995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sufl03019
]
FIL70_08995
Messenger RNA biogenesis [BR:
sufl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FIL70_08995
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
ERCC3_RAD25_C
MRP-L28
Motif
Other DBs
NCBI-ProteinID:
QDC37336
UniProt:
A0A5B8CGD0
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All DBs
Position
cSF1:complement(1901350..1902735)
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AA seq
461 aa
AA seq
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MQFTDLGLAEPILKALAAKKYASPTPIQAQAIPVLLKGKDLCGIAQTGTGKTAAFALPSL
DHFARNPKPTPLQGCRMLVLSPTRELAAQIAQSFRDYGRFLKLSVEVVFGGVPINRQIRA
LGRGVDIVVATPGRLLDLIDQRAFTIKDTEIFVLDEADQMMDMGFIHPLKRIAKLLPKER
QNLFFSATMPGEIEALASQFLHDPVKVSVAPQSTTAERVRQQATFVNQMEKQALLNLTIQ
KEDIDRALIFTRTKHGADRVVRFLEGAGIQAVAIHGNKSQAQRTTALQAFRHGHVKLLVA
TDIAARGIDVSGVSHVINFELPNVPEQYVHRIGRTARAGAEGVAISFVADDERPYLKAIE
RTTKVKLDVVPLPENFVEAVRNLPKAAPQRKGREQTPEQKTRRADGQRRYQDQQKQQRGN
TERAHRPDGEAAKPAKKNFRRRRGGSNVGAHKGAVQKTGGR
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttaccgaccttggccttgccgagccgatcctgaaggcgctggccgccaagaaa
tatgcctcgccgacgccgatccaggcgcaggccatccccgtgctgctgaagggcaaggac
ctgtgcggcatcgcgcagaccggcaccggcaagaccgctgccttcgcgctgcccagcctt
gaccatttcgcccgcaatcccaagccgacgccgctccagggctgccgcatgctggtgctg
tcgccgacgcgcgaactcgccgcgcagatcgcgcagagcttccgcgactatggccgcttc
ctgaagctgtccgtggaggtcgtgttcggcggcgtgccgatcaaccggcagatccgggcg
ctggggcgcggcgtcgacatcgtcgtggcgacgccgggccgtctgctcgacctgatcgac
cagcgcgccttcaccatcaaggacaccgagatattcgtcctcgacgaagccgaccagatg
atggacatgggcttcatccacccgttgaagcgcatcgccaagctgctgccgaaggagcgg
cagaacctcttcttctccgccaccatgccgggcgagatcgaggcgctggccagccagttc
ctgcacgatccggtcaaggtgagcgtcgcgccgcagtcgaccacggcggagcgggtccgg
cagcaggctacctttgtcaaccagatggagaagcaggcgctgctcaacctgacgatccag
aaggaagacatcgaccgcgcgctgatcttcacccggaccaagcatggcgccgaccgggtc
gtgcgctttctggagggcgcgggcatccaggccgtggcgatccatggcaacaagagccag
gcgcagcggaccaccgcgctccaggccttccgccatggccatgtgaagctgctggtggcg
accgacatcgccgcgcgcggcatcgacgtgtcgggcgtcagccatgtcatcaatttcgaa
ctgcccaatgtgccggaacaatatgtccaccgcatcggccgcacggcgcgggcaggggcg
gagggcgttgcgatcagcttcgtggcggacgacgagcggccttatctgaaggccatcgag
cggacgaccaaggtgaagctggacgtcgtcccgctgccggagaatttcgtcgaggcggtg
cgcaatcttcccaaggccgcgccgcagcgcaagggtcgggagcagacgccggagcagaag
acgcggcgcgccgacgggcaacgccgctatcaggaccagcagaagcagcagcgcggcaat
accgaacgggcgcatcggccggatggcgaagctgcgaagccggcaaagaagaatttccgg
cgccgtcgcggcggcagcaatgtcggcgcgcataagggcgcggtgcagaagaccggcggg
cggtaa
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integrated database retrieval system
