Sulfitobacter sp. D7: B5M07_10090
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Entry
B5M07_10090 CDS
T05714
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
suld
Sulfitobacter sp. D7
Pathway
suld03030
DNA replication
suld03410
Base excision repair
suld03420
Nucleotide excision repair
suld03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
suld00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B5M07_10090
03410 Base excision repair
B5M07_10090
03420 Nucleotide excision repair
B5M07_10090
03430 Mismatch repair
B5M07_10090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
suld03032
]
B5M07_10090
03400 DNA repair and recombination proteins [BR:
suld03400
]
B5M07_10090
Enzymes [BR:
suld01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
B5M07_10090
DNA replication proteins [BR:
suld03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
B5M07_10090
DNA repair and recombination proteins [BR:
suld03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
B5M07_10090
NER (nucleotide excision repair)
GGR (global genome repair) factors
B5M07_10090
MMR (mismatch excision repair)
DNA ligase
B5M07_10090
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
B5M07_10090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
DNA_ligase_ZBD
HHH_2
HHH_5
PTCB-BRCT
zf-IS66
Motif
Other DBs
NCBI-ProteinID:
AYE86436
UniProt:
A0A386TGH4
LinkDB
All DBs
Position
complement(2081873..2083993)
Genome browser
AA seq
706 aa
AA seq
DB search
MTSQIEVEALTKAQAETELARLAEVLNAANTAYHTEDAPEISDAEYDALKRRNAAIEARF
PDIKRADSPSEQVGAPVAEGFGKVRHAVPMLSLANAFDAEEVTEFDARIRKYLGLGSDAP
LAYTAEPKIDGLSLSLRYEKGVLVQAATRGDGAVGENVTANARTIENIPQELKNAPDLLE
VRGEVYMSHADFAALNARQAERGGKTFANPRNAAAGSLRQLDAEITRARPLQFFAYAWGA
LSEPLAETQKGAIDRLTELGFSTNPLTALCDGPSDMVAHYEKIEAQRATLGYDIDGVVYK
VDDLALQERLGFRSTTPRWAVAHKFAAELAWTRLEGIDIQVGRTGALSPVARLQPVTVGG
VVVSNATLHNEDYIKGLDSKGAEIRGGKDVRVGDWVQIYRAGDVIPKVADVDLSKRPSDA
EAFVYPTTCPECGSDAMREPGDAVRRCTGGLICPAQAVEKLIHFVSRKAFDIDGLGAKQV
EQFYHDGWIAEPADIFTLKERYGSGVQQLKNREGWGPKSADNLFQAIEDRREIPMARLIF
ALGIRHVGEAASSLIALHYGDWDSFEAAMAEARGLDGPAWDDLIGVDGVGSVMAGSLVSA
FAQEAERASIDRLVAHLTVIPAERPDTEGSPVAGKTVVFTGTLEKMSRAEAKARAERLGA
KVSGSVSGKTDILVAGPGAGSKAKKAADLGVETMDEDGWLALIEGK
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
gtgacatcccagatcgaggttgaagcgctgaccaaagcgcaggcagagacggagctggcc
cggctggccgaggtgctgaacgcggcgaacaccgcctatcatacggaagatgcaccagaa
atttccgacgcggaatatgacgcgctgaagcggcgcaatgccgcaatcgaagcgcgcttc
cccgacatcaagcgcgctgacagcccgtcagagcaagtcggcgcgccggtcgccgaaggg
ttcggcaaggtgcgacatgcggtgccgatgctctcgctcgccaatgctttcgacgccgag
gaagtcactgagttcgacgcccggatccgcaaataccttgggctggggtcggatgcgcca
ttggcctatacggccgagcccaagatcgacgggctgtcgctgtccctgcgctacgaaaag
ggtgtgctggtgcaggccgccacgcggggcgatggcgcggtgggcgaaaatgtcaccgcc
aacgcccgcaccattgaaaacatcccgcaagagttaaagaacgcgccggacctgctggag
gtgcgcggcgaagtctatatgagccacgccgatttcgcggcactgaacgcgcggcaggca
gaaaggggcggcaaaacctttgccaacccgcgcaatgccgccgccggatccctgcggcag
ctcgacgcagagattacccgcgcccggccattgcagtttttcgcctatgcttggggtgcg
ctctcggaacccttggctgagacgcagaagggcgcgattgaccgattgacggaactggga
ttttcgaccaaccctctgaccgcgctttgtgacgggccaagtgatatggtcgcccattac
gaaaagatcgaagcgcagcgcgccacgctgggctatgacatcgatggcgtggtctataag
gtcgacgatctcgcgcttcaggaacggcttggctttcgctccaccacgccgcgttgggcc
gtcgcccataaattcgccgccgaattggcgtggacccggcttgaggggatcgacattcaa
gttgggcgcaccggtgccttgtcgcccgtggcgcggttgcagccggtcacggtgggcggg
gtcgtcgtctccaacgcgacgctgcacaacgaagattacatcaaagggctcgacagcaag
ggcgccgaaatccgcggcggcaaggacgtgcgcgtgggcgattgggtgcagatataccgc
gcgggcgatgtgatccccaaagtggccgacgtggacctgtcgaaacgtccctctgatgcc
gaagcctttgtctatcccaccacctgcccggaatgcgggtcggatgcgatgcgggagccg
ggcgatgcggtgcggcgctgcaccggtgggttgatctgcccggcgcaggccgttgaaaag
cttatccatttcgtcagccgcaaggcatttgatatcgacggtctgggggccaaacaggtc
gaacagttttaccatgacggttggatcgcggagcctgcggatattttcaccttgaaagag
cgttacggcagcggcgtgcagcagttgaaaaaccgcgaaggctgggggccgaagtcggcg
gataacctttttcaggccatcgaagatcgccgtgaaataccgatggcgcgtctgattttt
gcccttggtattcgccatgttggcgaggcggcgtcgagcctgatcgcgctgcactacggc
gattgggacagttttgaggccgccatggccgaggcgcgcgggctcgacggccccgcttgg
gatgatctgattggcgtcgatggcgtcggcagcgtcatggcgggttcgctggtttcggcc
tttgcgcaagaggcagagcgtgcctcaatcgaccggttggtggcgcatctgaccgtgatc
ccggcggaacgccccgacaccgaaggcagccccgtcgcaggcaagaccgtcgtctttacc
ggcactttggagaagatgagccgggccgaggccaaggcccgggcggagcgtttgggggcc
aaggtttcaggctcggtcagcggcaaaaccgatattctggtcgccggaccgggggcgggg
tccaaggccaagaaggccgctgatctgggggtcgagacgatggatgaagatggctggctc
gccttgatcgaaggcaaatga
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