KEGG   Sulfitobacter sp. JL08: C1J05_12390
Entry
C1J05_12390       CDS       T05585                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
suli  Sulfitobacter sp. JL08
Pathway
suli03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:suli00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    C1J05_12390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:suli03019]
    C1J05_12390
Enzymes [BR:suli01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     C1J05_12390
Messenger RNA biogenesis [BR:suli03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     C1J05_12390
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19
Other DBs
NCBI-ProteinID: AXI55189
UniProt: A0A345RCA2
LinkDB
Position
complement(2540857..2542179)
AA seq 440 aa
MNDFSIMGLPKSLITRLTAMGITEPTPIQNQAIPHALNGRDVMGLAQTGTGKTAAFGLPL
VAQMLELGGRPAPKTLRGLVLAPTRELAGQIAENLRAYAQGTPIKVAMVVGGQSINNQIK
RLERGVDLLVATPGRLIDLMDRRALRLDETVFLVLDEADQMLDLGFIHALRKIAGMLPAE
RQTMLFSATMPKQMNELASSYLNKPIRVEVSPPGKAADKITQEVHFIAKAEKPKLLIEML
DKHRDELALVFGRTKHGCEKLMKSLVNAGYAAGSIHGNKSQGQRDRAIAAFKAGEIRVLV
ATDVAARGLDIPDVRHVYNFDLPNVPENYVHRIGRTARAGADGAAIAFCAPDEMGELKAI
EKAMKMPVPVASGRPWESSEIPDKPKGRGGRPGGGGQKRRFGGGGGGGGAKSSAGKPGGG
QRRRRSGGKGGGKPGGQRAA
NT seq 1323 nt   +upstreamnt  +downstreamnt
ttgaacgatttttcaatcatgggcttgcccaaatccctgatcacccgcctgacggcaatg
gggatcacggaaccaacgccgatccagaatcaggccatcccccatgcgctgaacgggcgc
gatgtgatgggcctggcgcagaccggcaccggcaagacagccgcattcggtctgccgctt
gtggcgcagatgctggaactgggcggacgcccggcgccgaaaaccttacgcggtcttgtt
ctggcgccgacgcgcgaactggcgggtcagattgccgaaaacctgcgcgcctatgcacaa
ggcaccccgatcaaggttgcgatggttgttggcggtcagtcaatcaacaatcagatcaaa
cggttggagcgcggtgttgatcttctggtggcgacgccggggcggttgatcgacctgatg
gaccgccgcgccctgcggctggacgaaaccgtttttctggtgctggatgaagccgatcag
atgcttgatctgggctttatccatgccctgcgcaagatcgcgggcatgttgccagccgaa
cgccagaccatgctgttttcggccacaatgcccaagcagatgaacgaactggcctcgagc
tatctgaacaaaccgatccgggtcgaagtgtcgccccccggcaaagccgccgacaagatc
acacaagaggtgcattttattgccaaggcggaaaagcccaagctgctgattgaaatgctg
gacaagcatcgcgacgagctggcgctggttttcgggcgcacgaaacacgggtgtgaaaag
ctgatgaagtcgctggtcaacgccggttatgcggcgggatcgatccatggcaacaaaagc
cagggccagcgggatcgcgcaatcgcggccttcaaggcaggcgagatccgcgttcttgtg
gccaccgatgtggccgcgcgcggtctggatatccctgatgtgcgccatgtttacaatttc
gatctgcccaatgtgccggaaaactatgtgcaccggatcgggcgaacagcacgtgcgggt
gcagatggcgctgcgattgcgttttgtgcgcctgacgagatgggcgaattgaaggcaatt
gaaaaggcgatgaaaatgccggtgccggtcgcgtccggacggccctgggaaagttcggaa
atacctgacaagcccaaaggtcgcggtggtcgccccggcggcggtggccagaaacgccgc
tttggcggcggtggtggcggcggtggcgcaaaatccagcgccggaaaacccggcggtggc
cagcgtcgtcgcagaagcggcggcaagggcggcggcaaacccggtggccagcgcgcggcc
tga

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