Sulfurospirillum diekertiae JPD-1: SJPD1_1483
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Entry
SJPD1_1483 CDS
T05109
Name
(GenBank) RNA polymerase sigma-54 factor RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
sulj
Sulfurospirillum diekertiae JPD-1
Pathway
sulj02020
Two-component system
sulj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sulj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SJPD1_1483
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SJPD1_1483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sulj03021
]
SJPD1_1483
Transcription machinery [BR:
sulj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SJPD1_1483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_38
MarR
Dehydratase_SU
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
ATB69592
UniProt:
A0A290HDF6
LinkDB
All DBs
Position
1422428..1423699
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AA seq
423 aa
AA seq
DB search
MKLRVSSTQTTKQKFSSTLRGWLPILQANLDSLVETLEPFVQENPFISVKSGSETPDKRF
EKKSFFSEVAKTSVSDTIEALTLDKKSLYQVLNEQVNPPLFPTEKSQRIAYEIIENINSE
GYFEVQALSEIAKKLDVKIEDVEKIRQRFAYLEPLGIGALDLKETFLFQLQDLSLENELY
DMVEMLIINFDTIESFGKEPLFHDALAIIKRFHNPPAIDFMEDEKEVIPDIFIYNLEGAI
EVRLNDAYYPEVILDTEGLDVDHSFVSQKIKDAKDLIDALEMRKATLYKIGLMIVEYQYD
FFFGKAIKPMKLKDLADDLGRNPSTISRAIAGKYLSCSRGVIPLKQFFATALEEDISNSA
IKEYMIELVKNESKIKPLSDIKLLELIEGKFNIKMVRRTITKYRQQFNIASSSERKKLYT
LQF
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacttagggtttctagcacacaaacaaccaaacaaaagttctcctcaactcttaga
ggttggcttcctatacttcaagccaatttagatagtttggtggaaacactggaacccttt
gtgcaagaaaatcctttcatcagtgttaaatcaggttcagaaacacccgataaacgtttt
gaaaagaaaagctttttctccgaagttgcaaaaacatcggtttctgataccattgaagca
ctgactttagataaaaaatcgctctatcaagtccttaatgagcaggtaaatccacccctt
ttccctactgaaaaatcacaacgaattgcgtatgaaattattgaaaatattaattcagaa
ggatattttgaagttcaagcattgagtgagattgcaaaaaagttggatgttaaaatcgaa
gacgtggaaaagataagacaacgctttgcctaccttgagcctttgggcattggggcactt
gatttaaaagagacctttttatttcaactccaagacctttctttagagaatgaactctat
gacatggttgaaatgctgattatcaactttgatactatcgaatcgttcggcaaagaaccc
ctgtttcatgatgccctcgctattattaagcggtttcacaatccacccgcaatcgatttt
atggaagatgagaaagaggttatccctgatatttttatctataatcttgaaggtgcgatt
gaagtgagactcaatgatgcttattatcctgaagtgatacttgatacggaagggctggat
gttgatcatagttttgtttctcaaaaaattaaagatgctaaagatcttattgatgctctt
gagatgcgtaaagcaacgctttataaaatcggattgatgatcgtagaatatcagtatgat
tttttctttggcaaagcgataaaaccgatgaaacttaaagacttagccgatgatctaggg
cgaaatccttcgactatttcacgtgccattgcgggaaaatacctttcctgtagccgtggt
gtgattcctttaaaacagtttttcgcaacggcattggaagaagatatttccaatagcgct
attaaagaatatatgattgaacttgttaaaaatgagagtaaaataaaacctctgagtgat
attaaacttttagaactgatagaaggaaaatttaacatcaaaatggtgcgaagaaccatt
accaaataccgacaacagtttaatatcgcaagctcatccgagcgtaaaaaactctacact
cttcaattttaa
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