Sulfurospirillum diekertiae JPD-1: SJPD1_2382
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Entry
SJPD1_2382 CDS
T05109
Name
(GenBank) UvrD/REP helicase
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
sulj
Sulfurospirillum diekertiae JPD-1
Pathway
sulj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sulj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SJPD1_2382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sulj03400
]
SJPD1_2382
Enzymes [BR:
sulj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SJPD1_2382
DNA repair and recombination proteins [BR:
sulj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SJPD1_2382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
PDDEXK_1
Cas_Cas4
Cas_NE0113
DEAD
Motif
Other DBs
NCBI-ProteinID:
ATB70478
UniProt:
A0A290HRZ6
LinkDB
All DBs
Position
complement(2311938..2314661)
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AA seq
907 aa
AA seq
DB search
MNLSSYLALEASAGSGKTFALSVRYLSLLFMGANPQKIVALTFTNKSAAEMKTRIFETLK
HLEDKDELEAICVQTGKSKEALLFEKERVMQTLLQADIKISTLDSFFSLILRHFALHVGL
QPDFKVGQNGLDEELVERFIKGCKSKNLYNALIAFSINEDKKLGDLFSLLDTLYQKKSEL
DISTLDEGHYPSLKPCLDILGQIRDYFEQCGLSDRGLKTLKAETLGDLLSKKYLERDDFG
YWDYKKYANGTTDILLRELKQALNKHVNAKEAYFLGQLGKLFAIYDESLRALMGEYGELR
FDDVTNLLYTLLRQEISKDFLYFRLDGVIEHLLIDEFQDTSIVQYQILLPLIEEIRSGQG
VKDFKTLFFVGDVKQSIYRFRGGAKELFRYAKKSLHLDVNALDTNYRSTEQVVNFVNEIF
TCKIKGYEPQKVAKATGEGYINVRIEEMIEPSVLEAISMLLKQGVKPKDIALLVHTNKDA
KVFKELVQEQFPALHVRLEATLKLIEVRSIKAIIALLKHLYFGDELYKAEFLVLCGRTWE
TPLSKSGWDLDATPLVFVQKIIKTYGLFDGSVDLLSFLEVASRYDEIESFLFALDELSDE
AKSEDVDGLRVLTVHKSKGLEFEHVIVCDRLSRDNNRSDTLLFSYDEVDIKGLYLTMGGR
ESVDAVYAKAKEHESVLMHEDRLNALYVAFTRAKRSLFVCAKAQNSAFEMLELSTTERGV
IGVSTKETIVIPSTMSVYQPKRYGAQEVASTSEDENESAEIASITFGIAQHYLLEMLDSF
DESSLKRAYIALQNRFAPLLDESTLQAIYQRGEKLISCKAFLDLIEGAKISKEQPLIYQK
ERKQIDLLLEFPDRIVVVDYKSSKKQSAKHQAQVKLYQEALSTIYNLPVAAYICYLQNDG
IELLKSL
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgagttcttatttagcccttgaagccagtgcaggcagtggcaaaacctttgcg
ctgagcgttcgctacctttcacttttgtttatgggcgccaatccacaaaagatcgtggca
ctgacgtttacgaacaaatcggcggcggagatgaaaacgcgcatttttgagacgctcaaa
caccttgaagacaaagatgaattagaggcgatttgcgtgcaaacgggcaaatcaaaagag
gcgttactctttgagaaagagcgcgtgatgcagacgttgcttcaagcggacatcaagatt
tcaacgctggactcttttttctccttgattttgcgccattttgccttacatgtaggcttg
caacctgactttaaagtagggcaaaatgggctcgatgaggagctggtggagcgtttcatc
aaagggtgtaaaagcaaaaatctctacaatgccttaatcgcttttagcatcaacgaagat
aaaaaactgggcgatctttttagcctactagatacgctttatcaaaaaaaatcagaactg
gacatcagcacattggatgaagggcattacccctctttaaaaccgtgtttggatatttta
gggcagatacgagactattttgagcagtgtgggctttccgatcgtggacttaagacgctt
aaagcagagacattaggggacttgctttccaaaaagtatctagagcgagacgattttggg
tattgggactataaaaaatatgccaatgggacaaccgatatacttttacgtgagctcaag
caggctttaaataagcatgtcaatgccaaagaagcgtactttttagggcaactgggcaaa
ctttttgcgatctacgatgagagcctcagagctttgatgggtgagtacggtgaacttcgg
tttgatgacgtgaccaatctgctctacacccttttgcgccaagagatcagcaaagatttt
ctctattttcgcttggatggtgtcattgaacatctgctcatcgacgagtttcaagacacg
agcattgtgcagtatcagattcttttgccacttattgaagagatacgttctgggcaggga
gtgaaagactttaaaacactcttttttgtgggcgatgtgaagcagtcgatctaccgtttt
cgtggcggggctaaagagttgtttaggtatgccaaaaagagtttgcatttagacgtcaat
gcgcttgataccaattaccgaagtaccgagcaggtcgtgaattttgtcaatgaaatcttt
acatgtaaaatcaaagggtatgagccacaaaaggttgccaaagccacgggtgaggggtat
atcaatgtacgcattgaagaaatgattgagccttctgttttagaagcgatttcaatgctt
ctaaaacagggtgtcaagcctaaagacattgcgctgttggtgcataccaacaaagatgca
aaagtctttaaagagcttgtgcaagagcagtttcccgctttacatgtaagacttgaggcg
acgctgaaactcattgaagttcgctctatcaaggccattattgcgctactgaaacacctc
tactttggcgatgaactctacaaagcagaattccttgtgctatgcggcaggacgtgggaa
acaccgctttccaaaagcggttgggatttagatgcaactcctttggtattcgttcagaaa
atcatcaaaacctacgggctgtttgatggcagtgtggatctgctcagtttcttagaagtt
gcgagtcgttacgacgagattgagagctttttatttgctctggatgaactgagcgatgaa
gccaaaagcgaagatgtggatggtttgcgtgttttgaccgttcacaaatccaaaggctta
gagtttgagcatgtcatcgtgtgtgatcgtttgagtcgtgacaacaatcgaagcgatacg
cttttatttagctacgatgaagtcgacatcaaagggctttaccttactatgggtggcaga
gaatcggtcgatgcagtctatgccaaagccaaagagcacgagagtgttttaatgcatgaa
gatagactcaatgcgctttatgtcgcttttacgagagccaaacgttccttgtttgtgtgt
gccaaagcgcaaaacagtgcgtttgagatgttggagttaagcacaacagagcgaggcgtg
ataggtgtttcaaccaaagagactatcgtcattccaagcaccatgagtgtctaccagcct
aagcgttatggcgctcaagaggtggcgagtacatctgaggatgagaatgaaagcgctgag
atcgcttcgattacctttggtattgcacagcactatttgttggagatgctggatagtttt
gatgaatcttcgctaaagagggcttacatcgcgctgcaaaaccgttttgcgccactgttg
gatgagtcaaccttgcaagcgatctatcaaagaggcgaaaaactcatttcttgtaaagcc
tttttggatttgatcgagggggcaaaaatatccaaagaacaaccgttgatttaccaaaaa
gagcgtaagcagattgatcttttgcttgaatttccagatcgtatcgtcgtagtggattat
aaaagttcaaaaaagcaaagtgcaaagcatcaagcacaggtgaagctctatcaagaagcc
ctctctacgatctataatttgccggtggctgcgtatatctgctacttacagaacgatgga
atcgagcttcttaaaagcttatag
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