KEGG   Sulfurospirillum diekertiae JPD-1: SJPD1_2382
Entry
SJPD1_2382        CDS       T05109                                 
Name
(GenBank) UvrD/REP helicase
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
sulj  Sulfurospirillum diekertiae JPD-1
Pathway
sulj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sulj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    SJPD1_2382
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sulj03400]
    SJPD1_2382
Enzymes [BR:sulj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     SJPD1_2382
DNA repair and recombination proteins [BR:sulj03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     SJPD1_2382
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_12 PDDEXK_1 Cas_Cas4 Cas_NE0113 DEAD
Other DBs
NCBI-ProteinID: ATB70478
UniProt: A0A290HRZ6
LinkDB
Position
complement(2311938..2314661)
AA seq 907 aa
MNLSSYLALEASAGSGKTFALSVRYLSLLFMGANPQKIVALTFTNKSAAEMKTRIFETLK
HLEDKDELEAICVQTGKSKEALLFEKERVMQTLLQADIKISTLDSFFSLILRHFALHVGL
QPDFKVGQNGLDEELVERFIKGCKSKNLYNALIAFSINEDKKLGDLFSLLDTLYQKKSEL
DISTLDEGHYPSLKPCLDILGQIRDYFEQCGLSDRGLKTLKAETLGDLLSKKYLERDDFG
YWDYKKYANGTTDILLRELKQALNKHVNAKEAYFLGQLGKLFAIYDESLRALMGEYGELR
FDDVTNLLYTLLRQEISKDFLYFRLDGVIEHLLIDEFQDTSIVQYQILLPLIEEIRSGQG
VKDFKTLFFVGDVKQSIYRFRGGAKELFRYAKKSLHLDVNALDTNYRSTEQVVNFVNEIF
TCKIKGYEPQKVAKATGEGYINVRIEEMIEPSVLEAISMLLKQGVKPKDIALLVHTNKDA
KVFKELVQEQFPALHVRLEATLKLIEVRSIKAIIALLKHLYFGDELYKAEFLVLCGRTWE
TPLSKSGWDLDATPLVFVQKIIKTYGLFDGSVDLLSFLEVASRYDEIESFLFALDELSDE
AKSEDVDGLRVLTVHKSKGLEFEHVIVCDRLSRDNNRSDTLLFSYDEVDIKGLYLTMGGR
ESVDAVYAKAKEHESVLMHEDRLNALYVAFTRAKRSLFVCAKAQNSAFEMLELSTTERGV
IGVSTKETIVIPSTMSVYQPKRYGAQEVASTSEDENESAEIASITFGIAQHYLLEMLDSF
DESSLKRAYIALQNRFAPLLDESTLQAIYQRGEKLISCKAFLDLIEGAKISKEQPLIYQK
ERKQIDLLLEFPDRIVVVDYKSSKKQSAKHQAQVKLYQEALSTIYNLPVAAYICYLQNDG
IELLKSL
NT seq 2724 nt   +upstreamnt  +downstreamnt
atgaatttgagttcttatttagcccttgaagccagtgcaggcagtggcaaaacctttgcg
ctgagcgttcgctacctttcacttttgtttatgggcgccaatccacaaaagatcgtggca
ctgacgtttacgaacaaatcggcggcggagatgaaaacgcgcatttttgagacgctcaaa
caccttgaagacaaagatgaattagaggcgatttgcgtgcaaacgggcaaatcaaaagag
gcgttactctttgagaaagagcgcgtgatgcagacgttgcttcaagcggacatcaagatt
tcaacgctggactcttttttctccttgattttgcgccattttgccttacatgtaggcttg
caacctgactttaaagtagggcaaaatgggctcgatgaggagctggtggagcgtttcatc
aaagggtgtaaaagcaaaaatctctacaatgccttaatcgcttttagcatcaacgaagat
aaaaaactgggcgatctttttagcctactagatacgctttatcaaaaaaaatcagaactg
gacatcagcacattggatgaagggcattacccctctttaaaaccgtgtttggatatttta
gggcagatacgagactattttgagcagtgtgggctttccgatcgtggacttaagacgctt
aaagcagagacattaggggacttgctttccaaaaagtatctagagcgagacgattttggg
tattgggactataaaaaatatgccaatgggacaaccgatatacttttacgtgagctcaag
caggctttaaataagcatgtcaatgccaaagaagcgtactttttagggcaactgggcaaa
ctttttgcgatctacgatgagagcctcagagctttgatgggtgagtacggtgaacttcgg
tttgatgacgtgaccaatctgctctacacccttttgcgccaagagatcagcaaagatttt
ctctattttcgcttggatggtgtcattgaacatctgctcatcgacgagtttcaagacacg
agcattgtgcagtatcagattcttttgccacttattgaagagatacgttctgggcaggga
gtgaaagactttaaaacactcttttttgtgggcgatgtgaagcagtcgatctaccgtttt
cgtggcggggctaaagagttgtttaggtatgccaaaaagagtttgcatttagacgtcaat
gcgcttgataccaattaccgaagtaccgagcaggtcgtgaattttgtcaatgaaatcttt
acatgtaaaatcaaagggtatgagccacaaaaggttgccaaagccacgggtgaggggtat
atcaatgtacgcattgaagaaatgattgagccttctgttttagaagcgatttcaatgctt
ctaaaacagggtgtcaagcctaaagacattgcgctgttggtgcataccaacaaagatgca
aaagtctttaaagagcttgtgcaagagcagtttcccgctttacatgtaagacttgaggcg
acgctgaaactcattgaagttcgctctatcaaggccattattgcgctactgaaacacctc
tactttggcgatgaactctacaaagcagaattccttgtgctatgcggcaggacgtgggaa
acaccgctttccaaaagcggttgggatttagatgcaactcctttggtattcgttcagaaa
atcatcaaaacctacgggctgtttgatggcagtgtggatctgctcagtttcttagaagtt
gcgagtcgttacgacgagattgagagctttttatttgctctggatgaactgagcgatgaa
gccaaaagcgaagatgtggatggtttgcgtgttttgaccgttcacaaatccaaaggctta
gagtttgagcatgtcatcgtgtgtgatcgtttgagtcgtgacaacaatcgaagcgatacg
cttttatttagctacgatgaagtcgacatcaaagggctttaccttactatgggtggcaga
gaatcggtcgatgcagtctatgccaaagccaaagagcacgagagtgttttaatgcatgaa
gatagactcaatgcgctttatgtcgcttttacgagagccaaacgttccttgtttgtgtgt
gccaaagcgcaaaacagtgcgtttgagatgttggagttaagcacaacagagcgaggcgtg
ataggtgtttcaaccaaagagactatcgtcattccaagcaccatgagtgtctaccagcct
aagcgttatggcgctcaagaggtggcgagtacatctgaggatgagaatgaaagcgctgag
atcgcttcgattacctttggtattgcacagcactatttgttggagatgctggatagtttt
gatgaatcttcgctaaagagggcttacatcgcgctgcaaaaccgttttgcgccactgttg
gatgagtcaaccttgcaagcgatctatcaaagaggcgaaaaactcatttcttgtaaagcc
tttttggatttgatcgagggggcaaaaatatccaaagaacaaccgttgatttaccaaaaa
gagcgtaagcagattgatcttttgcttgaatttccagatcgtatcgtcgtagtggattat
aaaagttcaaaaaagcaaagtgcaaagcatcaagcacaggtgaagctctatcaagaagcc
ctctctacgatctataatttgccggtggctgcgtatatctgctacttacagaacgatgga
atcgagcttcttaaaagcttatag

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