Candidatus Sulfuricurvum sp. RIFRC-1: B649_00015
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Entry
B649_00015 CDS
T02537
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
sulr
Candidatus Sulfuricurvum sp. RIFRC-1
Brite
KEGG Orthology (KO) [BR:
sulr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sulr03032
]
B649_00015 (gyrB)
03400 DNA repair and recombination proteins [BR:
sulr03400
]
B649_00015 (gyrB)
Enzymes [BR:
sulr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
B649_00015 (gyrB)
DNA replication proteins [BR:
sulr03032
]
Prokaryotic type
DNA Topoisomerases
B649_00015 (gyrB)
DNA repair and recombination proteins [BR:
sulr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B649_00015 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AFV96317
UniProt:
K7SA91
LinkDB
All DBs
Position
2761..5076
Genome browser
AA seq
771 aa
AA seq
DB search
MENYGASNIKVLKGLEAVRKRPGMYIGDTGHRGLHHLIYEVVDNSIDEAMAGHCDTITVT
LTKTGTAMVSDNGRGIPTDIHPGEGISAATVVLTVLHAGGKFDKDTYKVSGGLHGVGVSV
VNALSSDLKMTIFREGQSFEQNFKCGIPQEPLAVTGTTRKRGTTIEFFPDPSIFTETIIF
DYDYLAKRFRELAYLNPRITIVFKDDRNGASNTYHYEGGISQFVTDVNKKVVVAAPFAFS
EKIEDIEMDIAIMYNDSYDEKMFTFVNNINTPNGGTHEAGFRAGLTRVISNYNKQNGNAK
EKDIPLSGEDVSEGLICVVSVRVPEPQFEGQTKGKLGNTYVRPLVQKVTYEKLTKYFEEN
PIQAKAIIQKALMAARGREAAKKARELTRRKDAMTVGTLPGKLADCQSKDPAISELYLVE
GDSAGGSAKQGRDRVFQAILPLKGKILNVEKARLDKILKSEEITNMITALGCGIGEEFNE
DKLRYHKIIIMTDADVDGSHIQTLLLTFFFRYLPKIVENGYLYLAQPPLYRYKKGKKEIY
FKDDRVMNAFLIENGIEALEAEELNVGVNDLVSFFKMVDHYRSTLDALERRYALVDLIRY
FIENPDLIASSLSDLYTHVETFLNSKGYNILSKSVNDDDMHLFVQTKEGLEELHVNDDLF
ASPHFAEANYIYQKIQDWNLPLKGDLLELLTQITDYAKKGSYIQRYKGLGEMNPEQLWET
TMTPENRVLLRITVEDSESAGESFNLFMGDDVEPRRNYIETHAKDVKHLDI
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggaaaattacggtgctagtaatattaaagtcctaaaaggtctcgaagccgttcgaaaa
cgaccgggtatgtacatcggcgataccggtcatcgcgggcttcaccatctcatctacgaa
gtcgttgacaactcgatcgatgaagcgatggcagggcattgtgatacgatcactgtaacc
ctaacgaaaaccggtacagcaatggttagcgataacggtcgcggtattccgacggatatt
catccgggtgaggggatatctgcggctacggttgttttgaccgtattgcacgccggagga
aaatttgataaagatacctacaaagtctcgggcggtttgcacggggtaggggtatcggtt
gtaaatgcccttagttctgatttgaaaatgaccattttccgtgaaggtcaaagctttgaa
caaaatttcaaatgcggtatccctcaagagccgttagccgtaacggggacaacacgtaaa
cgtggaacaaccatcgagttttttccggatccttcaatctttaccgaaactattattttc
gattacgactatttggcaaaacgtttccgtgaactcgcctacctcaatcctcgtattaca
attgttttcaaagatgatcgtaacggtgcgagtaatacctatcactacgagggcggtatc
agccaatttgttaccgatgtcaataaaaaagtggtggttgctgctccgtttgcattcagt
gaaaaaatcgaagatatcgagatggatattgccatcatgtataacgacagttacgacgaa
aaaatgtttacgttcgtcaataacatcaatacccctaacggcggtacacacgaagccgga
ttccgtgccggattgacccgtgttatctctaactacaacaaacaaaacggtaatgccaaa
gagaaagatatccctttatcgggagaagatgtttctgagggtctaatttgtgttgtatcg
gtacgtgtaccggaaccgcagttcgaaggtcaaaccaaagggaaactcggaaatacctac
gttcgcccattggttcaaaaagtaacttatgagaaactgaccaaatatttcgaagagaat
ccgatccaagccaaagcaatcatccaaaaagcgctaatggcggcgcgcggacgtgaagcg
gcgaaaaaagcgcgtgagcttactcgtcgtaaagacgcgatgacagtgggaacattgccg
ggtaaactcgcagactgccaaagcaaagaccctgcaatcagtgaactctatctggtggaa
ggggactctgcgggcggttcggcaaaacaggggcgtgaccgtgttttccaagcgattttg
ccgctgaagggtaaaattctcaacgtcgaaaaagcccgtttggacaaaattctcaaatct
gaagagatcaccaatatgattaccgcactcggttgcggaatcggtgaagagtttaacgaa
gacaaactccgttaccataagatcattatcatgaccgatgctgacgtcgacggtagccat
attcaaacactgttattgacgttctttttccgatatttaccaaaaattgtggaaaacggc
tatctttatttggcacaaccgccattgtatcgctacaaaaaagggaaaaaagagatttac
tttaaagacgatcgcgttatgaatgcctttttgatcgaaaacggtatcgaagcgctggaa
gcggaagagttaaatgtcggggtgaatgatcttgtatcgttctttaaaatggtcgatcat
taccgtagtactctcgatgcattggaacgccgttatgcgcttgttgatttgattcgttat
ttcattgaaaatccggatttgattgcatcgtctcttagtgatctttatacccacgttgaa
accttcttgaattctaaaggctataatatcctctctaaaagcgtcaatgacgatgatatg
cacctatttgtccaaaccaaagagggacttgaagaacttcacgtcaacgatgatctgttt
gcatcgccgcattttgccgaagcaaactatatctaccaaaaaatccaagattggaatttg
cctctcaagggagatttactcgaattgttgacccaaattaccgattatgcgaagaagggt
tcatacattcaacgctacaaaggtctcggggaaatgaatcctgaacagctttgggaaaca
acaatgacaccggaaaaccgtgtattgctacgcattacggttgaagattctgaatctgcc
ggtgagtcgtttaatctctttatgggtgatgatgtcgaaccgcgccgtaactacatcgaa
acacacgctaaagacgtgaaacacttggatatataa
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