Sulfurovum sp. NBC37-1: SUN_1316
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Entry
SUN_1316 CDS
T00572
Symbol
uvrA
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
sun
Sulfurovum sp. NBC37-1
Pathway
sun03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SUN_1316 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sun03400
]
SUN_1316 (uvrA)
DNA repair and recombination proteins [BR:
sun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SUN_1316 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SUN_1316 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
nSTAND1
AAA_29
nSTAND3
AAA_16
RsgA_GTPase
APS_kinase
AAA_25
AAA_21
AAA_18
AAA_14
ATPase
Viral_helicase1
DnaJ_CXXCXGXG
SLFN-g3_helicase
AAA_33
RNA12
Zn-ribbon_8
Glyco_transf_61
zf_C2H2_13
Motif
Other DBs
NCBI-ProteinID:
BAF72269
UniProt:
A6Q9W0
LinkDB
All DBs
Position
complement(1357073..1359898)
Genome browser
AA seq
941 aa
AA seq
DB search
MAKKQDMIHVYGAKENNLKNIDISIPKNQLVVITGISGSGKSTLAFSTLYAEGQRRYIES
LSSYARQFLGRVGKPDVDKIDGLTPAIAIDQKTTSKNPRSTVGTITEIYDYLRLLFARVG
VQHCHKCGKPISSMSASDIIEEVLKLPEGAKLIIMAPLVKAKKGTFADMLESLRHKGYVR
AMIDGVMVRLDDEIELSKTKMHTIKVVIDRVVIKEDNRDRIGQDVEKALKESYGEMEIEV
LNHEELGLDRKDYHYSEHLACFDCKLSFEPLEPVSFSFNSPKGACPACDGLGIRYAIDLK
KVIDQDLSIDKGAVKIMYGFNKSYYTKFLNAFCEQNGIDIKKPYGELETHEQKAILYGNG
STVDFTWKRHKLKREWPGVVKFAHDMFKDEKDLSEYMTEKVCDKCNGHRLRPRSLAVKLE
GKNIADIIDMPIDESYAYFADRNNFSHLTEQQQMIAESILKELYERLYFLHDVGLGYITL
SRDARSISGGEAQRIRIASQIGSGLTGVMYVLDEPSIGLHERDTMKLIRTLNSLKEKGNS
VIVVEHDKETILAADYIVDIGPGAGEYGGKIVFSGDAKKLPKAKTLTADYLFGKKEISYS
HDNPQKKWIEIKNVTINNIENLDAKIPLHNFVCITGVSGSGKSSLILQTLLPVARELLNN
AKKVNKVDGVEITGLEHLDKVIYLDQSPIGRTPRSNPATYTGIMDEIRKLFAQTKEAELR
GYKIGRFSFNVKGGRCEKCQGDGQIKIEMHFLPDVLVSCDTCNGTRYNAQTLEVLYKGKS
IADVLAMSVGEALEFFKAIPSIAAKLKTLTAVGLDYITLGQNATTLSGGEAQRIKLSKEL
SRKDTGKTLYILDEPTTGLHFADVDRLTGVLHHLVELGNSVVVIEHNLDMVKNADYIVDM
GPEGGDKGGLIIATGSPEKLVEEYNKTGSYTGEYLAKELSS
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaaacaagatatgatccatgtgtatggagccaaagagaataatttaaaaaat
attgatatctctataccaaagaaccagctggtggtcattacgggaatttcgggttccggt
aaatcgacactggcattctctacgctctatgccgaaggacagagacgctacatcgagtct
ctctcctcctatgcaagacagttcctcggacgtgtggggaaacctgatgtggacaagatc
gacggtctaacccctgcgatcgcgatagaccagaagactacttcgaagaacccgcgttcg
acggtggggaccattacggagatctacgactacctcagactgctttttgcccgtgtgggc
gtacagcactgccataagtgcggaaagcccatctcttccatgtcggcttctgatatcatc
gaagaggtacttaaactgcccgaaggtgccaaactgatcatcatggcgccgctggtcaag
gcgaagaaaggtacctttgccgatatgcttgaatccctgcgacacaaagggtatgtccgt
gcgatgattgacggagtgatggtacgtctggatgatgaaatagagctcagcaaaaccaag
atgcataccatcaaagtggtcatcgaccgtgtggtcatcaaagaagataaccgcgaccgt
atagggcaggatgtagagaaggcgctcaaagagagttacggcgagatggaaatcgaagtg
cttaaccatgaagagcttgggctcgaccggaaagactatcactactctgagcatctggcc
tgttttgactgtaaactcagctttgagccgctggaaccggtcagtttttcgttcaactca
cccaagggtgcctgtcctgcctgtgacggtctggggatccgttatgccatcgacctcaaa
aaagtgatcgaccaggacctctccatcgataaaggtgcagtgaagattatgtatggattc
aataaaagctactatacgaaattcctcaacgctttttgtgaacagaacggtatcgatatt
aaaaagccctacggtgaacttgagacacatgagcagaaagcgatcctctacggtaacggg
tccactgtggactttacctggaaaagacataagctcaagcgtgaatggcccggtgtggtc
aagttcgctcatgacatgttcaaggacgagaaagacctttcagagtatatgacagagaag
gtctgtgacaagtgtaacgggcacaggcttcgtccgcgttcactggcggtgaagctcgaa
ggaaagaacattgccgatatcatcgatatgccgatcgatgaatcctatgcctattttgca
gacagaaataacttttctcacctgaccgagcagcagcagatgatcgcggagtctatcctc
aaagagctgtatgaacgtctttacttcctgcacgatgtgggtctgggctacattacactc
agccgtgacgccagaagtatctcgggtggtgaggcacagcgtatccgtatcgcttcgcag
atcggttcggggctgacaggggtcatgtatgtactcgatgaaccaagtatcggtctgcat
gagcgtgatacgatgaaattgatacgtacactcaattctctcaaagaaaaaggtaattcc
gtgatcgtagtcgaacatgacaaggagacgattcttgcagcggattacattgtcgatatc
ggcccgggagcaggggagtacggtgggaagatcgttttttcgggagatgccaaaaaactg
cctaaagccaaaacgcttacggccgattacctttttggtaagaaggagatctcctattcg
catgacaatccgcaaaagaagtggatagaaattaaaaatgtgacgatcaacaacatcgag
aatctcgatgcaaagatcccgctgcataactttgtctgtatcacgggtgtgagcggaagc
ggaaagagctcgctgatcctccagacacttttgcctgtggcaagggaactactcaacaac
gccaagaaggtcaacaaagtggatggtgtggagatcacggggcttgaacatcttgacaaa
gttatttatctcgaccagagccccatcggacgaacaccgcgttccaatccggcgacctat
acgggtatcatggatgagatacgcaaactttttgcccagaccaaagaagccgaactgcgc
ggatacaagataggacgtttctctttcaatgttaaaggcggacgctgcgagaagtgccag
ggggacggacagatcaaaatagagatgcacttccttcctgatgtgctggtcagctgtgat
acctgtaacggtaccaggtacaatgcccagacacttgaagtgctttacaaaggcaaatcg
attgccgatgtactggcgatgagtgtaggggaagccctggaattcttcaaagccattcct
tccattgccgccaagcttaaaacactgacagcggtcggactcgactatattacacttgga
cagaatgctacaacgctttcgggtggtgaagcgcagcgtatcaaactgagcaaagagctc
agccgtaaagatacaggtaaaacactttatatactcgatgaaccaaccacgggacttcat
tttgccgatgtggacagacttaccggggtactgcaccacctggtggaactgggtaattct
gttgtagttattgagcataacctcgatatggtcaaaaatgcggattatatcgtagacatg
ggacctgaaggtggagacaagggtggtttgatcattgcaacgggttcaccggaaaaactg
gtggaagaatataataaaacaggctcctatactggtgaatatttggctaaagagttaagt
tcctga
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