Stigmatella aurantiaca: STAUR_5004
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Entry
STAUR_5004 CDS
T01425
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
sur
Stigmatella aurantiaca
Pathway
sur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
STAUR_5004 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sur03400
]
STAUR_5004 (recO)
DNA repair and recombination proteins [BR:
sur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
STAUR_5004 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
STAUR_5004 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
RecO_N_2
FtrD-like
Motif
Other DBs
NCBI-ProteinID:
ADO72782
UniProt:
E3FGS3
LinkDB
All DBs
Position
complement(6182238..6182972)
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AA seq
244 aa
AA seq
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MERFVDEALVLSTVDYGEADRMVTLLTRQHGKLTAFAAGARKSKRRFAGALEPFMYLRVH
LVETRGSTVRLDSTDILAGYYAARQELPLIARALYAVEMCRELTRDHEPHPELFALLEEY
LVRLNAKEAGPTSLLAFELSALAHAGLMPRFDACALCGGEPGERPRFDQAHGGAVCEPCG
VRARDAVAVPAALLAGLRALQEGHRTPLAPELRAQARGILNVFIAHHLGRRLKSVDFMAQ
VGLD
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggagcggttcgttgacgaggcgctggtgctgtccaccgtggactacggggaggcagac
cggatggtgacgctcctgacgcgtcagcacggcaagctcacggctttcgctgccggggcg
cggaagagcaagcggcggttcgcgggggcgctcgagccgttcatgtacctgcgggtccac
ctcgtggagacgcgcggcagtacggtgcgattggactccaccgacatcctggcgggctac
tacgccgcgcggcaggaactgcccctcattgcccgggccttgtacgccgtggagatgtgc
cgcgaactgacgcgcgaccatgagcctcacccggagctgtttgctctcctggaggagtac
ctcgtccggctgaatgccaaggaagcaggcccgacctcgctgctcgccttcgagctgtcc
gcgctggcgcacgcgggcctgatgccccgtttcgatgcctgcgcgttgtgtggtggcgag
cccggggagcgcccgaggttcgatcaggcgcatgggggcgcggtgtgcgagccatgcggt
gtgcgagcccgggacgcggtggcggtgcccgccgcgttgctggcgggactgcgcgcgttg
caggagggccatcgcacgcccctggccccggagttgcgcgcccaggcgcggggaatcctc
aacgtcttcatcgcgcaccacctgggccgccgcctcaagagcgtggacttcatggcccag
gtggggctggactga
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integrated database retrieval system
