Sporosarcina ureae: SporoP32a_15130
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Entry
SporoP32a_15130 CDS
T04877
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sure
Sporosarcina ureae
Pathway
sure03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sure00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SporoP32a_15130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sure03019
]
SporoP32a_15130
03016 Transfer RNA biogenesis [BR:
sure03016
]
SporoP32a_15130
Enzymes [BR:
sure01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SporoP32a_15130
Messenger RNA biogenesis [BR:
sure03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SporoP32a_15130
Transfer RNA biogenesis [BR:
sure03016
]
Prokaryotic type
tRNA degradation factors
SporoP32a_15130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_2
SPATA25
KH_2
Motif
Other DBs
NCBI-ProteinID:
ARK22757
LinkDB
All DBs
Position
3115519..3117639
Genome browser
AA seq
706 aa
AA seq
DB search
MSEQKKVYTLDWAGRTLTIEAGQLAKQANGAVLVRYGETTVLSTVTASKKPKPLDFFPLT
VNYEERMYSVGKIPGGFIKREGRPSENAVLTSRLIDRPIRPLFPDGFRNDVQVISLVMSV
DQDCSSEISAMIGSSLALSISDIPFDGPIAGVQVGRIDGEFIVNPTPSQLETSEIDLVVA
GTKDAINMVEAGAKEVTEDIMLEAIMFGHDQIKKLVEFQEMIIAEIGKPKFEIELFELDT
DISKEVKDRCEKELITAIQTEEKHAREEAINEVKASVLEHYTEIEADETTIKQVKAVLEQ
MVKDEVRRLITVDKVRPDGRGLDEIRPLSSETGLLPRSHGSALFTRGQTQVLSVCTLGAL
GENQIIDGIGSDESKRFMHHYNFPNFSVGETGPIRGPGRREIGHGALGERALQPMLPDEV
EFPYTMRLVAEVLESNGSSSQASICASTMAMMDAGVPLKAPVAGIAMGLIKKDEDYSILS
DIQGMEDHLGDMDFKVAGTSKGITALQMDIKIDGLSRQILEESLAQAKIGRIKILDHMLT
TISSTREELSEYAPKIIVIHIKPDKIRDVIGPGGKVINKIIEETQVKIDTEQDGTVYISS
PNSEMNEKAKKMIENIVREAKVGEYYLAKVKRIEKFGAFLEIFPGKDGLLHISEIQEART
KEVEDVLKLDDELFVKVIEIDRQGRVNLSRKVVILEEKEKEQASKE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacagaaaaaagtttatacactcgattgggctggacgtacgctaacaatcgaa
gccggccaacttgcaaagcaagctaatggtgctgtgctcgttcgttatggcgaaacaaca
gtactttctacggtgactgcttctaaaaagccgaagcctttagatttcttccccctaaca
gtaaattatgaggaacgtatgtactcagtaggtaaaattccgggtggatttattaagcgt
gaagggcgtccttcagaaaatgcggtattgactagtcgattaattgaccgtccaattaga
cctttattcccagatggcttccgtaatgatgttcaagttatttcacttgttatgtctgta
gatcaggattgttcatctgagatttcggcaatgatcggttcttcattagctctttccatt
tcggatattccatttgatggtccgattgcaggtgttcaagtaggtcgcatcgatggagaa
ttcatcgttaatcctacacctagccaacttgaaacatctgaaattgatttggtcgtagca
ggaacaaaagatgcaatcaacatggtagaagcaggagctaaagaagtgactgaagatatc
atgctagaagcaattatgtttggtcatgatcaaattaagaaattagtcgaattccaagaa
atgataatagctgaaatcggtaagccaaagtttgagattgagttattcgaattggataca
gacatcagtaaagaagtgaaagatcgttgtgaaaaagaattaataacagcgatacaaact
gaagagaagcatgcacgcgaagaagcgatcaatgaagtgaaagcatccgttcttgagcat
tatacagaaatcgaagcagatgaaactacaatcaagcaagtgaaagcagttctagagcaa
atggtgaaagatgaagtacgccgtctgattacagtcgacaaagtacgcccagatggccgt
ggacttgacgaaatacgtccattatcttctgaaacgggtctactacctcgctctcacggt
tccgcattattcacacgtggacaaacgcaagtgctaagcgtatgtacattaggtgcgctt
ggtgaaaaccaaattattgatggtataggctcagatgagtctaagcgcttcatgcaccat
tataacttcccaaactttagtgttggggaaacaggaccaattcgtggtcctggccgtcgt
gaaattggtcacggtgcgttaggagagcgagcgttgcagcctatgcttccggatgaagta
gaattcccttacacaatgcgtctcgttgcagaagtattggagtctaatggttcttcttca
caagcatcgatctgtgcctctacaatggctatgatggatgctggcgtaccacttaaagca
ccagtagcaggaattgctatgggcttgatcaaaaaggatgaagattattctattctgtcg
gatattcaaggaatggaagatcatttaggcgatatggactttaaagtagcaggtacaagt
aaaggtatcactgcacttcaaatggatattaaaatcgacggattatctcgtcagatttta
gaagaatctcttgcgcaagcaaaaatcggccgtattaaaattcttgatcatatgttgaca
acaatttcttcaacacgtgaagaattgtctgaatatgcaccgaaaattatagtgattcat
attaaaccagacaaaatccgtgatgtaatcggacctggcggtaaagtaatcaataaaatt
atcgaagaaactcaagtgaaaatcgatacagagcaagacggaacggtttacatctcgtca
ccaaactctgaaatgaatgagaaagctaagaagatgattgaaaatatcgtacgtgaagca
aaagtaggcgagtactacttggcaaaagttaaacgtattgagaaatttggcgcattctta
gaaatcttccctggcaaagatggtttgcttcatatttctgaaattcaagaagcacgcacg
aaagaagtggaagatgtacttaaattagatgatgagctatttgtaaaagtaattgaaatc
gacagacaaggtcgagtcaatctttcacgtaaagtagtcattctagaagaaaaagaaaaa
gaacaagctagcaaagagtaa
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