Sulfurifustis variabilis: SVA_0423
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Entry
SVA_0423 CDS
T05321
Name
(GenBank) penicillin-binding protein
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
sva
Sulfurifustis variabilis
Pathway
sva00550
Peptidoglycan biosynthesis
sva01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sva00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SVA_0423
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sva01003
]
SVA_0423
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sva01011
]
SVA_0423
Enzymes [BR:
sva01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
SVA_0423
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SVA_0423
Glycosyltransferases [BR:
sva01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
SVA_0423
Peptidoglycan biosynthesis and degradation proteins [BR:
sva01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
SVA_0423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
BAU47005
UniProt:
A0A1B4V173
LinkDB
All DBs
Position
complement(419531..421825)
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AA seq
764 aa
AA seq
DB search
MTGRRRPARPSRSRRVLLVLAALGLLFGLYTIYLDFTVRSHFEGKRWALPARVYASPLEI
YPGRHLSAVDLGEELVALGYRSGTSGEPGTFQRTRDAFEIVTRPFTFWDGPQPAMHVRLT
FDGDRVAALEDPEGRSIPIARLDPLLIGGIYPAHNEDRVLVKLDEVPPVLVKALLAIEDR
KFYQHHGVDPRGIARALLANVRAGDAVQGGSTLTQQLVKNFYLSAERTLSRKLNEALMAL
LLDAHYGKDEILEAYLNEIYLGQDGSRAIHGFGLAAQHYFDRPLPHISLTQAALLVGLVK
GPSYYDPRRNPKRALERRNLVLAELAERGVITTADYLRAKAAPLEVTAKAPVGTSPYPAF
LGLVHRQLRRDYSESDLRSEGLLIFTTLDPRTQRAAEKSLTSRLGALEKQRRLPAGSLEG
AVIVTSTEHGEILGLVGGRNARFEGFNRALDAERQVGSVIKPAVYLAALSRPEKYTLVTP
LDDSPLSWKEPGIDEWTPQNYDREFHGEVDLRTALAESYNVSAARLGLSLGVPEVVDQAR
RLGVERALPPYGSTLLGSVTLTPFEVTQMYQTIASGGFRTPLRAIREVMTPQGEPLKRYG
IAVEQAADPGAVYLLTTALQHAVRAGTGTGLSRYLAAELDVAGKTGTTNDLRDSWFAGFT
GDRLAVVWVGRDDNQPAGLTGASGALTVWGDMMARLDPEPLVPAAPENIEMVAIDPDTRL
RADSGCAGIELPFIRGSAPVETAPCAAGTPAKALKGWFRRLLER
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
gtgactggccgccgtcgtcccgcacgcccttcccgctcgaggcgagttcttctcgtcctc
gccgctctgggacttcttttcggtctttacacgatctacctggatttcaccgtgcgctcg
catttcgagggcaagcggtgggcgttgcccgcgcgcgtctacgcaagcccgctcgaaatc
tatccgggccgacacctgtccgcggtcgatctcggcgaggagctggtggcccttggctac
cgaagcggcacatccggcgagccgggaacgttccagcgaacgcgcgacgccttcgagatc
gtgacgcggccgttcacgttctgggacggtccgcagccggcgatgcacgtacgcctcacg
ttcgacggcgaccgggtcgccgcgctcgaggatccggaagggaggagcatccctatcgcg
cgactggatccgttgctgatcggcgggatctacccggcccacaacgaagaccgggtgctg
gtgaagctcgacgaggtaccgccggtactggtcaaggcgctactcgccatcgaggaccgc
aagttctaccagcaccacggcgtagacccgcgcgggatcgcgcgtgcgctgctcgccaac
gtgcgcgccggggacgcggtgcagggcggtagcacgctgacgcagcagctcgtcaaaaac
ttctacttgagcgccgagcgcaccctgtcgcgcaagctgaacgaggcgctcatggcgctg
ctgctcgacgcgcactacggaaaggacgagatcctcgaggcgtacctcaacgagatctac
ctcggtcaggacggcagtcgcgcgatccacggctttgggctcgccgcgcagcattacttc
gaccgcccgctaccccacatttcgctgacgcaggcggcgctgctggtcggcctcgtcaag
ggaccgtcctattacgatcctcggcggaatccgaagcgcgcactcgaacgacggaacctc
gtgctggccgagctcgcagagcgaggtgtcatcacgacggccgattacctgcgtgcgaag
gccgcgccgctcgaggtgacggcaaaggcgccggtcggcacgtccccttatcccgcgttc
ctcggactggtgcaccgtcagctgcgtcgcgattactcggagagcgacctccgctctgag
ggactgctgatcttcaccacgctcgacccccgaacgcagcgagccgccgagaagtcgctg
acgagccggctcggcgcactcgagaagcagcgccgtctcccggccggctcgctcgagggt
gcggtgatcgtgacgagcacggagcacggcgagatcctcggcctcgtcggcgggcggaat
gcccgcttcgagggtttcaaccgcgcactcgacgcggagcggcaggtgggctcggtgatc
aagcccgcggtgtacctcgcggcgctgtcgcgccccgagaagtacacgctcgtaacgccg
ctcgacgacagtccgctgagctggaaggagccgggcatcgacgagtggacaccgcagaac
tatgaccgcgagttccacggtgaggtggatctgcggactgccctcgccgagtcctacaac
gtctccgccgcgcgcctcggccttagcctcggcgtgccggaggtggtcgatcaggcgcgc
cgcctgggggtcgaacgcgccctgcccccttacggttccacgctgctcgggagcgtcacg
ctgacgccctttgaggtgacccagatgtatcaaacgatcgcgagcggcggcttccggacc
ccgctgcgtgccattcgggaggtcatgactcctcaaggagagccgctcaagcgctacggc
atcgccgtcgagcaggcagctgatcccggggcggtgtacctgctcaccaccgctcttcag
cacgccgtgcgtgcgggcaccggcacgggcctctcgcgttatctcgctgcggagctcgac
gtcgccggcaagaccggaaccaccaacgacctgcgcgacagctggtttgccgggttcacc
ggtgatcggctcgccgttgtctgggtcggtcgcgatgacaaccagccggccgggctcacc
ggcgcgagcggcgcgctgaccgtctggggagacatgatggcgcggctcgatccggaaccg
ctcgtccccgccgctccggagaacatcgagatggtcgctatcgaccccgacacccggttg
cgcgccgatagcggctgcgccggcattgagctacctttcatccgtggttccgcccccgtc
gaaacggcgccctgcgccgccgggacgccggcgaaggcgttgaaaggatggttccggagg
ttgctggagcgatga
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