Sulfurifustis variabilis: SVA_0997
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Entry
SVA_0997 CDS
T05321
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
sva
Sulfurifustis variabilis
Pathway
sva03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SVA_0997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sva03400
]
SVA_0997
Enzymes [BR:
sva01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SVA_0997
DNA repair and recombination proteins [BR:
sva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SVA_0997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_22
AAA_11
ResIII
AAA_25
DUF5398
Motif
Other DBs
NCBI-ProteinID:
BAU47576
UniProt:
A0A1B4V246
LinkDB
All DBs
Position
1001085..1004645
Genome browser
AA seq
1186 aa
AA seq
DB search
MTRPQPLALFEAPLDAASLIEASAGTGKTWTITGLYVRLLLEAELAVREILVVTFTEAAT
EELRDRIRRRLLDARDVLRGGAAKDEFDRSLLARFPDRERATDRLTNALRSFDEAAIYTI
HGFCQRALADSAFEGARPFEMELIADEGSLVQEIADDFWRREFHAAAPAVVAHLLACRLT
PEKLADGILRHVGKPFLAIDGPAAPPDLAQLERAYADAYARARALWHAGRDDITSLLRNA
GLDGRKYQVRHFDSWFLQMDAFLEPERAHPAICDKLEKFTPAQLADAAKKGPPPRHPFFE
ACAGLLAAHAALTGALDAFLADAKVRLLTEVNRELAVRKERRRVQSYNDLLLKLAQALDP
PGGDALARLLRARYRAALIDEFQDTDPVQFEIFRRIYGNEAAPVFFVGDPKQAIYSFRGA
DVFAYLAARATARAHYTLATNWRSTPELVRAVNVLFGRTARPFVFEDIAFHEAVAAKREQ
DTLVVEEDIDAPLRFWFFSGENGKPLAKGTAGAQAARATAAEIARLLTLGSQDRARLGPR
ALAGGDIAVLVRKHQQGREVRDALAALGVPSVQHSQESVFETEEASELERVLLACAEPLR
EGRVAAALATEMLGMTARALSEASADPVAWEARLQPFDEYHRLWRDRGFIHMYRELLARE
HVYARLLRLPDGERRMTNLLHLGELAHAAAHRERLGIHRLIRWFAEKRRRPNREDEEAQL
RLESDADLVKIVTVHKSKGLQYPIVFCPYLWDGRMREGEGDAVVFHDPEQGYRAGADFGS
TRRATRERLAAREELAENLRLLYVALTRARHRCYAVWGCIKDAGRAPLAWLLHPPADAGE
AAFKAWWEADARDAAAMRGALAAIAEASQGAIAVLPEPRAGAPWQPAAPTPGELAARDWS
RRIEPGPRMTSFSALTLGRDAELPDYDADAPVEPVPAAGVRDIHGFPRGTVAGQCLHAIL
ERVDFQRADAAAVEPVARAALEAHGIARDWVPVVCDTVARVVATPLDASGLRLADVARAE
RVDEMEFTYPLARLAPAELRRVLGRYGRASVLFREEIESLSFAPLQGYMKGFIDLVFAAG
ERFYIADYKSNWLGAGRPAYAEEHLPHAMAESAYDLQYLVYAVALHRHLGRHLPDYDYDR
HFGGVFYLFLRGMSPEAGAGFGVFRDRPARELIEALDDYFRTGAVR
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcgcccgcagccgctcgccctcttcgaagcgccgctcgacgcggcctccctcatc
gaggcgagcgccggtaccggcaagacctggaccatcaccgggctctacgtgcgcctgctg
ctcgaggcggagctcgccgtgcgcgagatactggtcgtcaccttcaccgaggcggcgacc
gaggagctgcgcgaccgcatccggcggcgcctgctcgacgcccgcgacgtgttgcgcggc
ggcgcggcgaaggacgagttcgaccggtcgctgctcgcgcgcttccccgatcgcgagcgc
gcgaccgaccggctgaccaacgcgctgcgcagcttcgacgaggccgcgatctacaccatc
cacggcttctgccagcgcgcgctcgccgacagcgcctttgagggcgcccgccccttcgag
atggagctgatcgccgacgagggaagcctcgtgcaggagatcgccgacgacttctggcgc
cgcgagttccatgccgcggccccggccgtcgtcgcgcacctgctcgcgtgcaggctgacg
ccggagaagctcgcggacgggatcctgcgccacgtcggcaagccgtttctcgcgatcgac
ggcccggccgcgccgccggacctggcgcagctcgagcgcgcctatgccgacgcctatgcc
cgggcgcgcgccctctggcacgccgggcgtgacgacatcacgagcctgctgcgcaacgcc
ggattggacggaaggaagtaccaggtacgacatttcgacagctggttccttcagatggat
gcgttcctcgagcccgagcgcgcgcatccggcgatctgcgacaagctcgagaagttcacg
cccgcgcagctcgcggacgcggcgaagaaggggcccccgccgcggcatcccttcttcgag
gcgtgcgccgggctgctcgcggcccacgccgcgctgaccggcgcgctcgacgcgttcctc
gccgacgccaaagtgcggctgctcacggaggtgaatcgggagctcgcggtgcgcaaggag
cgccggcgcgtgcaatcgtacaacgacctgcttttgaagctcgcgcaggcgctcgacccc
ccgggcggcgacgcgctcgcgcggcttctgcgcgcacgctatcgcgccgcgctcatcgac
gagttccaggacaccgacccggtgcagttcgaaatcttccgccggatctatggcaacgaa
gccgcgccggtcttcttcgtcggcgatcccaagcaggcgatctacagcttccgcggcgcg
gacgtgttcgcctatctcgccgcacgcgcgacggcgcgggcgcactacacgctcgccacc
aactggcgctcgacgccggagctcgtgcgggcggtcaacgtcctcttcggccggaccgcg
cgcccgttcgtcttcgaggacatcgccttccacgaggcggtggcggcgaagcgggagcag
gacacgctcgtcgtcgaggaggatatcgacgcgccgctgcggttctggttcttctcaggc
gaaaacggcaagccgctcgccaagggcaccgccggcgcgcaggcggcgcgtgccaccgcc
gcggagatcgcccggctcctcacgctcggaagccaggaccgtgcgcgcctcggaccgcgc
gcgctcgccggcggcgacatcgcggtgctcgtgcgcaagcaccagcaggggcgggaggtg
cgcgatgccctggcggcgctcggcgtgccgagcgtgcagcactcccaggagagcgtcttc
gagacggaggaggcgagcgagctcgagcgcgtgctgctcgcgtgcgccgagccgctgcgc
gagggccgcgtggcggcggcgctcgcgaccgagatgctcggcatgacggcgcgcgcgctg
agcgaggcgtccgccgacccggtcgcctgggaggcgcggctgcagccgttcgacgagtac
caccgcctgtggcgcgaccgcggcttcatccacatgtatcgcgagctgctcgcgcgcgag
catgtctacgcgcggttgctgcggctgcccgacggcgagcgccgcatgaccaacctgttg
cacctgggcgagctcgcgcatgccgcggcgcaccgcgagcgcctcggcatccaccggctg
atcagatggttcgccgagaagcgccgccgccccaaccgcgaagacgaggaggcccagctc
cggctcgagagcgacgccgatctcgtgaagatcgtgacggtgcacaagagcaagggcctg
cagtacccgatcgtgttctgcccgtatctgtgggacgggcgcatgcgcgagggcgagggc
gacgcggtcgtgtttcacgaccccgagcaggggtaccgcgccggagccgatttcggcagc
acgcgacgcgcgacgcgcgagcgcctcgcggcgcgcgaggagctcgccgagaacctgcgc
ctgctctacgtcgcgctgacgcgcgcgcggcaccgctgctatgccgtctggggctgcatc
aaggacgccgggcgcgcgccgctcgcgtggctgctgcacccgccggccgatgccggcgag
gcggcgttcaaggcgtggtgggaggctgacgcgcgcgacgcggccgccatgcgcggtgcg
ctcgccgcgatcgccgaggcatcgcaaggcgccatcgccgtgcttccggagccgcgcgca
ggcgcgccctggcagccggccgcgccgacacccggcgagctcgcggcgcgtgactggtcg
cggcgcatcgagcccggtccgcggatgacgagcttctcggccctgacgctcgggcgcgat
gcggagctgccggactacgacgccgacgcgcccgtcgaacccgtgcccgcggccggggtg
cgcgacattcacggctttccgcgcggcaccgtcgccgggcagtgcctccacgccattctc
gagcgcgtcgacttccagcgggccgacgcggccgccgtcgagcccgtggcgcgcgcggcg
ctcgaggcacacggcatcgcgcgcgactgggtgccggtcgtgtgcgacacggtggcgcgc
gtggtcgcgacgccgctcgacgcgagcggcctgcgtctcgcggacgtcgcccgggcggag
cgcgtcgacgagatggagttcacctatccgctcgcgcgcctcgcgcccgccgagctccga
cgcgtgctcggccggtacgggcgcgcgtcggtcctgttcagggaagagatcgaatccctc
tcgttcgctccgctccagggttacatgaagggcttcatcgacctcgtgttcgcggccggc
gaacgcttctacatcgcggattacaaatccaactggctcggcgcggggcggccggcgtac
gccgaggagcatctgccgcacgcgatggcagagtccgcctacgatttgcagtacctggtc
tacgcggtcgcgctgcaccggcacctgggcagacacctgccggattacgactacgaccgc
cacttcggcggcgtcttctatctcttcctgcgcggcatgagtccggaggcgggggcgggt
ttcggcgtctttcgcgatcggcccgcgcgcgagctgatcgaggcgctcgacgattacttt
cgtacgggagcggtgcggtga
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