Saccharomonospora viridis: Svir_30730
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Entry
Svir_30730 CDS
T00980
Name
(GenBank) RNA polymerase sigma-70 factor, TIGR02947 family
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
svi
Saccharomonospora viridis
Brite
KEGG Orthology (KO) [BR:
svi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svi03021
]
Svir_30730
Transcription machinery [BR:
svi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Svir_30730
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
DUF2802
Sigma70_ECF
HTH_23
DUF1350
Motif
Other DBs
NCBI-ProteinID:
ACU98048
UniProt:
C7MXX0
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All DBs
Position
3334589..3335239
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AA seq
216 aa
AA seq
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MPSTQSPVDIPTAASEPGTNTERELAERFEREAMPLVDQLYSAAMRMTRNPADAEDLVQE
TYLRAYAAFSSFKEGTNLKAWMYRILTNTYINGYRKRQRQPVQQPTEEITDWQLAKAESH
TSAGLRSAEVEALDKLPDTDVKAALQQLPEDFRLAVYLADVEGFAYKEIAEIMNTPIGTV
MSRLHRGRGQLRSLLADVARERGFIRSGQQREVARR
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
ttgccgagcacccagagccctgtcgacatccccacggcagcgtcggagcccggaacgaac
accgagcgcgagctggccgagcggttcgaacgtgaagccatgccgctggtcgatcagctc
tactcggcagcgatgcgcatgacgcgtaatccggccgatgccgaggatctcgttcaagag
acgtatctcagggcgtacgcagccttctcctcgttcaaggaaggcacgaacctcaaggcg
tggatgtaccgcatcctcaccaacacctacatcaacggttaccgaaagcggcagcggcaa
ccggtccagcaacccaccgaggaaatcaccgactggcagctggcgaaggcggagagccac
acctcggccggcctgcggtcggccgaggtcgaagcgttggacaaactgcccgacacggac
gtgaaggcggcactgcaacagctgccggaggacttccggttggccgtctatcttgccgac
gtcgaggggttcgcctacaaagagatcgctgagatcatgaacacacccatcggcaccgtg
atgtcgcgtctgcaccgtggtcggggccagttgcggagcctgctcgccgacgttgcccgg
gagcggggtttcatccgctccggtcagcagcgggaggtggcacgtcgatga
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