Saccharomonospora viridis: Svir_31450
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Entry
Svir_31450 CDS
T00980
Name
(GenBank) Exodeoxyribonuclease I subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
svi
Saccharomonospora viridis
Brite
KEGG Orthology (KO) [BR:
svi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svi03400
]
Svir_31450
DNA repair and recombination proteins [BR:
svi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Svir_31450
Archaeal homologous recombinant proteins
Svir_31450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
FBPase_2
Abhydrolase_4
Hydrolase
baeRF_family2
Motif
Other DBs
NCBI-ProteinID:
ACU98118
UniProt:
C7MYM9
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All DBs
Position
complement(3410233..3411393)
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AA seq
386 aa
AA seq
DB search
MRLLHTSDWHVGRTFHGTDLLADQDAVLRHLAELVEQLSVDVVLVAGDVYDRAVPSAEAV
RVATAALRRLREAGAQLVITSGNHDSAARLGAFADFAEAGGLHLRTTVDAIDRPVLLEDE
HGPVALYGIPYLEPDPARHALGVPEAKGHTGVLTEAMRRVKEDLTEREPGTRSVVLAHAF
VTGGVGSDSERTIAVGGVEQVPGSVFDGVDYVALGHLHGPQRLAEHLRYSGSPLAYSFSE
TSRKSVWIVDLDAQGLAGVDRVELPVPRELATVRGRLDELLEDPEYGKLSGCYLSVTLTD
PVRPVDAMRRLRTRFPHAVHLEWQPEGGAGAALRYSEAVRGRTDLEIAEAFIADCRGSEP
TERERDLLVAALEAAGRANPERKDVR
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
gtgcgactcctccatacctccgactggcatgtgggacggacgttccacggtaccgacctg
ctcgccgatcaggacgcggtacttcggcacctggccgaactcgtcgagcagctgtccgtc
gacgtcgtactcgtggccggtgacgtctacgaccgtgcggtcccgtccgccgaggccgtt
cgtgtggcgacggcggccctacggcggctccgtgaggccggagcacagctcgtgatcacg
tcggggaaccacgactcggcggcccggctcggtgcgttcgccgatttcgccgaggccggt
ggtctgcacttgcgcaccacggtcgatgcgatcgatcggcccgtgctgctcgaggatgag
cacgggccggtggcgttgtacggcatcccttatctcgaacccgatccggcgcggcatgcg
ctcggcgttcccgaggccaaagggcataccggcgtgctcaccgaggccatgcgtcgggtc
aaagaggatctgacggagcgggaaccgggcacgcgatcggtggtgctcgcccacgccttc
gtgaccggtggcgtgggcagtgactcggagcgcacgatcgcggtcggtggggtcgagcag
gttccgggatccgtcttcgacggtgtggattacgtggccctggggcatctgcacgggcca
cagcggttggccgagcacctgcgttactccggaagtcccttggcgtactcgttctccgag
acttcccgcaaatcggtgtggatcgtggacctggacgcgcagggactggcgggagtggac
cgggtcgaactccccgtgccgcgtgagctggcgaccgtgcgaggacggttggacgaactg
ctggaggatcccgagtacggaaagctgagtgggtgttacctgtcggtcacgctcaccgat
cccgtgcgaccagtcgacgccatgcgcagattgcgcacccgcttcccccacgccgtccat
ctcgaatggcagcccgagggcggtgccggtgcggcactgcggtactcggaggcggtgcgt
gggcgtacggatctggagatcgccgaggccttcatcgctgactgtcggggcagtgagccg
accgagcgtgaacgtgacctgctggtcgcggcgttggaagccgcgggaagggcgaacccc
gagcggaaggacgtgcgatga
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