Streptomyces violaceusniger: Strvi_1465
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Entry
Strvi_1465 CDS
T01602
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
svl
Streptomyces violaceusniger
Brite
KEGG Orthology (KO) [BR:
svl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svl03021
]
Strvi_1465
Transcription machinery [BR:
svl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Strvi_1465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_28
HTH_AsnC-type
HTH_24
TnsD
GerE
HTH_29
GcrA
Motif
Other DBs
NCBI-ProteinID:
AEM81205
UniProt:
G2NXU8
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All DBs
Position
1323260..1324123
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AA seq
287 aa
AA seq
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MQVKNAYPELTGEVDMVGALLETTRADRGGAAAAGDRRVLKRFRRSVGEPKSVTNTADRS
RTRSPKGTGGAPLAEPATTATFATDADAPAWTPPTWEEIVSTHSARVYRLAYRLTGNQHD
AEDLTQEVFVRVFRSLSTYTPGTFEGWLHRITTNLFLDMVRRRQRIRFDALGEDAAERLP
SREPSPQQHFNDTHFDADVQQALDTLAPEFRAAVVLCDIEGLSYEEIAATLGVKLGTVRS
RIHRGRSHLRKALQHRAPAARTGQQHEVAAVEPRVTAPRLSGEVGIA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcaaaaatgcttatccggagctaacgggcgaggtggatatggtaggggctcta
ctggagaccaccagagccgacaggggaggtgcggctgcggccggtgaccggcgagtgctg
aagcgctttcgcaggtcagtgggcgagccgaaatccgtgaccaacaccgctgaccgttct
cgcacccgtagcccgaagggcacgggaggtgcgcccctcgccgaacccgccaccaccgcg
accttcgccacggacgcggacgcgccggcgtggacgcctcctacctgggaggagatcgtc
agcacgcacagtgcacgggtctaccgcctcgcctaccggctcaccggtaaccagcacgac
gccgaggatctcacccaggaggtgttcgtccgcgtcttccgctcgctgtcgacgtacacc
ccgggcacgttcgagggctggctgcaccgcatcaccaccaatctcttcctcgacatggtc
cgccgtcggcagcgcatccgcttcgacgccctcggcgaggacgcggcggagcggctcccc
agccgcgagccctctccccagcagcacttcaacgacacccacttcgacgccgatgtgcag
caggcgctggacaccctcgccccggagttccgggccgccgtggtgctctgtgacatcgag
gggctgtcgtacgaggaaatcgcggccactctgggcgtcaagctgggcaccgtgcgcagc
cgcatccaccgcggccgctcgcatctgcgcaaggcgctgcagcaccgtgcccccgcggcg
cggaccggtcagcagcatgaggtcgccgcggtggagccgcgtgtcacggccccccggctg
agcggggaggtcggaatcgcgtga
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