KEGG   Shewanella violacea: SVI_0354
Entry
SVI_0354          CDS       T01206                                 
Name
(GenBank) sensory box histidine kinase/response regulator
  KO
K11527  two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
Organism
svo  Shewanella violacea
Brite
KEGG Orthology (KO) [BR:svo00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:svo01001]
    SVI_0354
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:svo02022]
    SVI_0354
Enzymes [BR:svo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.13  Protein-histidine kinases
    2.7.13.3  histidine kinase
     SVI_0354
Protein kinases [BR:svo01001]
 Histidine kinases
  Other
   SVI_0354
Two-component system [BR:svo02022]
 Other families
  Unclassified
   SVI_0354
SSDB
Motif
Pfam: Response_reg HATPase_c PAS_3 HisKA PAS PAS_4 PAS_9 PAS_8 dCache_1 PAS_7 HATPase_c_5
Other DBs
NCBI-ProteinID: BAJ00325
UniProt: D4ZEU5
LinkDB
Position
422050..425757
AA seq 1235 aa
MKSTEPDLQLKSPIQKNYNRAVFYTYIGVIIMALITAWFFFDGQKSQLMEKREEQVERRV
LQIDLLLESSIRAVKSLRNVAVDHLRLGELVRKERLPQYEKFDESGQYFTLEPSYAESGE
PFTNMGRITGAGSLNGRSEKFYQELEMLFELSLSFPVAIEAAPKASSIYYISKHRIMSYF
PWPSDEQRFRDELLNKNQFQLATPAMNPQRSVFWSPAYVDPGGKGLLTTLGVPIYLEDEF
IGSINLDMTLSSLAKQMHLYFKMPGTVILLDQNNNILSHSDDDKSEISRVFHISQKIPSE
LHSIPESELFDAHEGIIRNGYYIHSVALQNAPWRLLYLQDRDELFKDSWDKLELTFILVV
LALSVLVTIVHWQTRRSFVNPASRLLTHLESCSLEPRKPPEQISQGWEPWFQLVSRIFEE
NLQYTKHLAEQNRRLDKLVARRTARLKETTERREREYALLRSLLDSIPEAIVFKDKEGKY
LGCNKAAERMLGYTESELIGQESIKLTTQEQSVRIKAEDERVLAERTPLRYQEKVEFAGK
PVLLDTLKLPFYNRRGELLGLIAVWRDVTREYESAEQLRLSEERYHLAMDAVEDGLWDWY
LDSKQIICNPAYYSMLGYKSNEFPALVSTLDDLIHPDDRIRVQEYREQYLGDPIGAFDVE
FRMRGKSGQYHWLLSRGRVVEYTVDNQPKRMVGTHKDITRHKSNEVALLEAKQDAESANL
SKSEFLANMSHEIRTPMNAIIGMLQLAQRTELTAKQEDYLDKAGFSAQSLLRIINDILDF
SKIEAGKLELEKVAFPLDKVLDHALDLNALKSQQKGVELLLYAPVTAGLILEGDPLRLGQ
VLINMLSNAVKFTQTGEIELGCEDVGERDHRITLKFWVRDTGIGISKEQQASLFDAFAQA
DGSTTRKYGGTGLGLSISKHLVSMMGGQMQVQSEMGVGSTFSFTISFEIAEEAEVKPMIV
PERLGSLKTLVVDDNPTALQIYATVMRDFHFEVDTAANGSEALYKLEKSSVDLLLLDWMM
PEMDGIQVIEELDRMVADGRLDKRPIVIMMTGYAAEPLKEDADRSNIYAMLQKPFKASAL
FDEIISAFTEEPKVNSVIEVEAEEVVDTHVGMVLLVEDNFINQQVATELLKSAGYEVDVA
DNGQIAIDMIAEKDFDAVLMDIQMPVMDGLTATKEIRKHFSLQELPIIAMTAHAMSGDRE
KSLSAGMNAHITKPIVLNELFDTLSYWIKQKDEVS
NT seq 3708 nt   +upstreamnt  +downstreamnt
atgaaatcgactgagccagatcttcaactgaagtcgccgatacagaaaaactataaccgt
gctgttttttatacctatattggcgtgattatcatggcgctgatcactgcctggttcttc
ttcgatggccagaaatctcagcttatggagaaaagagaggagcaggtcgagcgccgtgtt
ctgcagatagatctattgctggagtcgagtatccgagcggtaaagagtctgagaaatgtc
gcagtcgatcatctcaggcttggtgagttggtgcgtaaagagcgtttgcctcagtatgaa
aaattcgatgagagtggccagtattttaccttagagccaagctatgccgagagtggtgaa
ccttttaccaatatggggcgtatcacaggtgcaggctccctcaatggccgcagcgagaag
ttttatcaagaactggagatgttgttcgaattatctctctctttccccgtggcaatcgaa
gcggctcctaaagcctcatctatctattacatctctaagcataggatcatgtcctatttc
ccctggccatcggatgagcaaagattcagagatgaattgcttaataagaaccagttccag
ttagccacgccagccatgaaccctcagcgcagcgtattctggagcccagcttatgtggac
ccgggcggcaaaggcttgctgaccaccttaggtgtgcctatttatttggaagacgaattt
atcggctcgatcaatctggatatgaccttgtcctcgctggcgaaacaaatgcatctctat
tttaagatgccgggtacggttattctgctggatcagaataataatattctttcccacagt
gatgatgacaagtctgagatcagtcgtgtgttccatatcagtcagaagatcccctctgaa
ttgcactccattcctgagtcggaactgttcgatgcccacgaagggatcatcagaaatggt
tactacatccactcggtagccttgcagaatgctccctggcgcctgctctatttgcaggat
agagatgagttattcaaggattcctgggataagctcgagctgacatttatcttagtggta
ttggccctgtcggtattggtgaccatagtacactggcagacccgccgctcattcgtgaac
ccagcttcccgtctgttgacccatctggaatcttgttctttggagcctcgcaagcccccg
gagcagatatctcagggttgggaaccttggttccaactggtgagtcgaatcttcgaagaa
aacctgcaatataccaagcatctagccgagcaaaatcgaaggctagataagctggtggca
cgccgtacagcaagattgaaagagactacagagcggcgagagcgggaatatgccttgcta
agatctctgctggactccatccctgaggcgattgtcttcaaggataaagagggtaagtat
ttaggctgtaacaaggcagccgagcgtatgttgggctataccgagagtgaactcataggt
caggagtcgataaaactcactacacaagagcagtcggtgcgtattaaagctgaggatgaa
cgcgtactggcagagcgaactcccctgcgctatcaggagaaggtggaatttgccggtaag
cctgtgttactcgatacccttaaactgcccttctataatcggcgcggtgagctgttaggt
ttgattgctgtttggcgtgatgtgactcgagagtatgagtcggccgagcagttaagattg
tccgaggagcgttatcacttagccatggatgcggtagaagatggcttgtgggattggtat
ctggactcgaaacagatcatctgtaatccagcttactattctatgcttggctacaagagc
aatgagtttccggcattggtttctaccttagacgacttgattcatcccgatgacaggatt
cgggtgcaagagtatcgcgagcagtatcttggcgatcctatcggtgccttcgatgtcgaa
ttcaggatgcgcggcaagagtggccagtatcactggttactctcccgtggtcgcgtggtg
gaatacactgtcgataatcagccaaaacgtatggtgggtactcataaagatattactcgg
cataagagtaacgaagttgctctgcttgaggctaaacaagatgccgagtctgctaactta
tctaagagtgaatttctggccaatatgagccatgagatccgcacgcccatgaatgccatt
atcggcatgttgcagctggctcagcgtacagaactcacggctaagcaggaagattattta
gataaggccggcttctcggctcagtctctgctgaggatcatcaatgatattctcgatttc
tctaaaattgaggcgggtaaattagagctggagaaggtggcatttccgctggataaggtg
ctggatcatgccctagaccttaatgctctcaagtcgcaacagaagggagtcgagctgctc
ctctacgccccagtcacagcaggattaatcctcgagggtgatcccctgcgcttaggtcag
gtgctgatcaacatgctctctaatgcggtcaagtttactcagactggtgagatagagttg
ggttgtgaagatgtgggtgagcgtgatcatcgcatcacccttaagttctgggtccgtgac
accggcatagggatcagtaaggagcaacaggctagtttgttcgatgctttcgctcaagcc
gatggctctaccactcgtaagtatggtggcacaggtcttggtctctctatcagtaagcat
ctagtgtccatgatgggcggtcagatgcaggttcagagtgagatgggggtaggtagtacc
ttcagtttcaccatcagcttcgagattgccgaagaggccgaagttaaacctatgatagtg
cctgagcgtttaggcagtcttaagactctagtggtcgatgataacccgacggcactgcag
atctatgccacagtgatgcgtgatttccacttcgaagtggatactgctgctaatggttca
gaggcactttataagctggagaagtcatcggtagatcttctactgctcgattggatgatg
cctgagatggatggcattcaggtgatcgaagagctagatcgcatggtggccgatggtcga
ttagataagcgtcccatcgtcatcatgatgacaggctatgccgcagaacccttaaaagaa
gatgcggatcgctcaaatatttacgccatgctacagaagccgtttaaagcatcagccctg
ttcgatgagatcatcagcgctttcaccgaagagcctaaggtcaattctgtgatagaagta
gaagctgaagaagtggtcgatacacatgtgggcatggtcttgctggtagaggataacttc
atcaaccagcaggttgccaccgaactccttaagagtgcgggctatgaggtggatgttgcc
gataacggtcaaatagccatagatatgatcgccgagaaggatttcgatgcggtactcatg
gatattcagatgccggtgatggacgggttaaccgcaacaaaagagatcagaaagcacttt
agtctgcaggagctgcctatcatagccatgacggctcacgccatgtctggtgatagagag
aagagtctatcggcggggatgaatgctcatattactaaaccaatcgtcctcaatgagctg
ttcgataccttaagttactggattaagcagaaagatgaggtgagttaa

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