Shewanella violacea: SVI_0354
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Entry
SVI_0354 CDS
T01206
Name
(GenBank) sensory box histidine kinase/response regulator
KO
K11527
two-component system, sensor histidine kinase and response regulator [EC:
2.7.13.3
]
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
svo01001
]
SVI_0354
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
svo02022
]
SVI_0354
Enzymes [BR:
svo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
SVI_0354
Protein kinases [BR:
svo01001
]
Histidine kinases
Other
SVI_0354
Two-component system [BR:
svo02022
]
Other families
Unclassified
SVI_0354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
HATPase_c
PAS_3
HisKA
PAS
PAS_4
PAS_9
PAS_8
dCache_1
PAS_7
HATPase_c_5
Motif
Other DBs
NCBI-ProteinID:
BAJ00325
UniProt:
D4ZEU5
LinkDB
All DBs
Position
422050..425757
Genome browser
AA seq
1235 aa
AA seq
DB search
MKSTEPDLQLKSPIQKNYNRAVFYTYIGVIIMALITAWFFFDGQKSQLMEKREEQVERRV
LQIDLLLESSIRAVKSLRNVAVDHLRLGELVRKERLPQYEKFDESGQYFTLEPSYAESGE
PFTNMGRITGAGSLNGRSEKFYQELEMLFELSLSFPVAIEAAPKASSIYYISKHRIMSYF
PWPSDEQRFRDELLNKNQFQLATPAMNPQRSVFWSPAYVDPGGKGLLTTLGVPIYLEDEF
IGSINLDMTLSSLAKQMHLYFKMPGTVILLDQNNNILSHSDDDKSEISRVFHISQKIPSE
LHSIPESELFDAHEGIIRNGYYIHSVALQNAPWRLLYLQDRDELFKDSWDKLELTFILVV
LALSVLVTIVHWQTRRSFVNPASRLLTHLESCSLEPRKPPEQISQGWEPWFQLVSRIFEE
NLQYTKHLAEQNRRLDKLVARRTARLKETTERREREYALLRSLLDSIPEAIVFKDKEGKY
LGCNKAAERMLGYTESELIGQESIKLTTQEQSVRIKAEDERVLAERTPLRYQEKVEFAGK
PVLLDTLKLPFYNRRGELLGLIAVWRDVTREYESAEQLRLSEERYHLAMDAVEDGLWDWY
LDSKQIICNPAYYSMLGYKSNEFPALVSTLDDLIHPDDRIRVQEYREQYLGDPIGAFDVE
FRMRGKSGQYHWLLSRGRVVEYTVDNQPKRMVGTHKDITRHKSNEVALLEAKQDAESANL
SKSEFLANMSHEIRTPMNAIIGMLQLAQRTELTAKQEDYLDKAGFSAQSLLRIINDILDF
SKIEAGKLELEKVAFPLDKVLDHALDLNALKSQQKGVELLLYAPVTAGLILEGDPLRLGQ
VLINMLSNAVKFTQTGEIELGCEDVGERDHRITLKFWVRDTGIGISKEQQASLFDAFAQA
DGSTTRKYGGTGLGLSISKHLVSMMGGQMQVQSEMGVGSTFSFTISFEIAEEAEVKPMIV
PERLGSLKTLVVDDNPTALQIYATVMRDFHFEVDTAANGSEALYKLEKSSVDLLLLDWMM
PEMDGIQVIEELDRMVADGRLDKRPIVIMMTGYAAEPLKEDADRSNIYAMLQKPFKASAL
FDEIISAFTEEPKVNSVIEVEAEEVVDTHVGMVLLVEDNFINQQVATELLKSAGYEVDVA
DNGQIAIDMIAEKDFDAVLMDIQMPVMDGLTATKEIRKHFSLQELPIIAMTAHAMSGDRE
KSLSAGMNAHITKPIVLNELFDTLSYWIKQKDEVS
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgactgagccagatcttcaactgaagtcgccgatacagaaaaactataaccgt
gctgttttttatacctatattggcgtgattatcatggcgctgatcactgcctggttcttc
ttcgatggccagaaatctcagcttatggagaaaagagaggagcaggtcgagcgccgtgtt
ctgcagatagatctattgctggagtcgagtatccgagcggtaaagagtctgagaaatgtc
gcagtcgatcatctcaggcttggtgagttggtgcgtaaagagcgtttgcctcagtatgaa
aaattcgatgagagtggccagtattttaccttagagccaagctatgccgagagtggtgaa
ccttttaccaatatggggcgtatcacaggtgcaggctccctcaatggccgcagcgagaag
ttttatcaagaactggagatgttgttcgaattatctctctctttccccgtggcaatcgaa
gcggctcctaaagcctcatctatctattacatctctaagcataggatcatgtcctatttc
ccctggccatcggatgagcaaagattcagagatgaattgcttaataagaaccagttccag
ttagccacgccagccatgaaccctcagcgcagcgtattctggagcccagcttatgtggac
ccgggcggcaaaggcttgctgaccaccttaggtgtgcctatttatttggaagacgaattt
atcggctcgatcaatctggatatgaccttgtcctcgctggcgaaacaaatgcatctctat
tttaagatgccgggtacggttattctgctggatcagaataataatattctttcccacagt
gatgatgacaagtctgagatcagtcgtgtgttccatatcagtcagaagatcccctctgaa
ttgcactccattcctgagtcggaactgttcgatgcccacgaagggatcatcagaaatggt
tactacatccactcggtagccttgcagaatgctccctggcgcctgctctatttgcaggat
agagatgagttattcaaggattcctgggataagctcgagctgacatttatcttagtggta
ttggccctgtcggtattggtgaccatagtacactggcagacccgccgctcattcgtgaac
ccagcttcccgtctgttgacccatctggaatcttgttctttggagcctcgcaagcccccg
gagcagatatctcagggttgggaaccttggttccaactggtgagtcgaatcttcgaagaa
aacctgcaatataccaagcatctagccgagcaaaatcgaaggctagataagctggtggca
cgccgtacagcaagattgaaagagactacagagcggcgagagcgggaatatgccttgcta
agatctctgctggactccatccctgaggcgattgtcttcaaggataaagagggtaagtat
ttaggctgtaacaaggcagccgagcgtatgttgggctataccgagagtgaactcataggt
caggagtcgataaaactcactacacaagagcagtcggtgcgtattaaagctgaggatgaa
cgcgtactggcagagcgaactcccctgcgctatcaggagaaggtggaatttgccggtaag
cctgtgttactcgatacccttaaactgcccttctataatcggcgcggtgagctgttaggt
ttgattgctgtttggcgtgatgtgactcgagagtatgagtcggccgagcagttaagattg
tccgaggagcgttatcacttagccatggatgcggtagaagatggcttgtgggattggtat
ctggactcgaaacagatcatctgtaatccagcttactattctatgcttggctacaagagc
aatgagtttccggcattggtttctaccttagacgacttgattcatcccgatgacaggatt
cgggtgcaagagtatcgcgagcagtatcttggcgatcctatcggtgccttcgatgtcgaa
ttcaggatgcgcggcaagagtggccagtatcactggttactctcccgtggtcgcgtggtg
gaatacactgtcgataatcagccaaaacgtatggtgggtactcataaagatattactcgg
cataagagtaacgaagttgctctgcttgaggctaaacaagatgccgagtctgctaactta
tctaagagtgaatttctggccaatatgagccatgagatccgcacgcccatgaatgccatt
atcggcatgttgcagctggctcagcgtacagaactcacggctaagcaggaagattattta
gataaggccggcttctcggctcagtctctgctgaggatcatcaatgatattctcgatttc
tctaaaattgaggcgggtaaattagagctggagaaggtggcatttccgctggataaggtg
ctggatcatgccctagaccttaatgctctcaagtcgcaacagaagggagtcgagctgctc
ctctacgccccagtcacagcaggattaatcctcgagggtgatcccctgcgcttaggtcag
gtgctgatcaacatgctctctaatgcggtcaagtttactcagactggtgagatagagttg
ggttgtgaagatgtgggtgagcgtgatcatcgcatcacccttaagttctgggtccgtgac
accggcatagggatcagtaaggagcaacaggctagtttgttcgatgctttcgctcaagcc
gatggctctaccactcgtaagtatggtggcacaggtcttggtctctctatcagtaagcat
ctagtgtccatgatgggcggtcagatgcaggttcagagtgagatgggggtaggtagtacc
ttcagtttcaccatcagcttcgagattgccgaagaggccgaagttaaacctatgatagtg
cctgagcgtttaggcagtcttaagactctagtggtcgatgataacccgacggcactgcag
atctatgccacagtgatgcgtgatttccacttcgaagtggatactgctgctaatggttca
gaggcactttataagctggagaagtcatcggtagatcttctactgctcgattggatgatg
cctgagatggatggcattcaggtgatcgaagagctagatcgcatggtggccgatggtcga
ttagataagcgtcccatcgtcatcatgatgacaggctatgccgcagaacccttaaaagaa
gatgcggatcgctcaaatatttacgccatgctacagaagccgtttaaagcatcagccctg
ttcgatgagatcatcagcgctttcaccgaagagcctaaggtcaattctgtgatagaagta
gaagctgaagaagtggtcgatacacatgtgggcatggtcttgctggtagaggataacttc
atcaaccagcaggttgccaccgaactccttaagagtgcgggctatgaggtggatgttgcc
gataacggtcaaatagccatagatatgatcgccgagaaggatttcgatgcggtactcatg
gatattcagatgccggtgatggacgggttaaccgcaacaaaagagatcagaaagcacttt
agtctgcaggagctgcctatcatagccatgacggctcacgccatgtctggtgatagagag
aagagtctatcggcggggatgaatgctcatattactaaaccaatcgtcctcaatgagctg
ttcgataccttaagttactggattaagcagaaagatgaggtgagttaa
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integrated database retrieval system