Shewanella violacea: SVI_1985
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Entry
SVI_1985 CDS
T01206
Name
(GenBank) helicase, Snf2 family
Organism
svo
Shewanella violacea
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
CTI
AAA_14
Motif
Other DBs
NCBI-ProteinID:
BAJ01956
UniProt:
D4ZJV7
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Position
2287729..2289813
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AA seq
694 aa
AA seq
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MLAGWSIDFQLINRYSLVQAHTWYGELSHQAPDKQWFDLELGVEVDGKKINLLPYLVKAI
RQGLLQNLSDTETVLMELDSGQRLSLPADRIKQILSVLVELYETKPLSVDDTLTMSMNQL
TRIAELADRDKINKKEWQWLGSQWLQNKAQQLYSYLEVDGNDKGAVSKNSHGKRPGFTVL
PPVGLNAELREYQQLGLNWLQFLKKNEFSGMLADDMGLGKTIQTLSSILLDKEAGNLSSP
CLVVAPTSLLANWLHEAETFAPELRLLLWSGPKRHRLQDKIKDCDLLITSYGTLQQDVEL
WAKQHFHLVILDEAQTIKNVRSRINRVVGSLSSTHRLCLTGTPLENHLGELWSLFNFLMP
GFLGTYAQFQRHYQVPIEKEQDDERRCALVQRIAPFMLRRLKSEVAKELPDKTVINEFIS
LTETQRDLYETIRLTMSEEVRKAVSVSGVKRNRLAISNALLKLRQVCCHPKLLKLDHLQQ
SSQDNVYLDTGWDTSNIDVSHKLGSVNGLQLAEDVSKLDTRSGKLNWLADKLPGMLEEGR
RVLIFSSFTSMLTLIGELLENLGISFVELTGKSRDRGALVKRFQQREVPVFLISLKAGGA
GLNLTAADVVIHTDPWWNPAAEQQASDRAHRIGQDKSVFVYKLICKETVEERIQLLQESK
NNLAQSIYQQESLAVSDMTGDDWLELLKPINLDD
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgttggcaggctggtccatagattttcaattaatcaatcgttattccttagtacaagct
catacatggtatggagagcttagtcatcaagccccagataaacaatggtttgaccttgag
ctaggagtcgaagttgatggcaagaagattaatttactgccttatctggtcaaagccata
agacagggattgttgcaaaacctcagtgatacagaaacggtactcatggagctcgactct
ggacagcgcttgtcgctgcctgccgataggataaagcagatcttatctgtactcgttgag
ctttacgaaacaaagccgctgtcggtggatgacaccttaaccatgtccatgaatcagttg
acccgaattgctgaactggctgaccgagataaaatcaacaagaaagagtggcaatggctc
ggaagtcaatggttacaaaataaagctcagcagctgtactcttatttggaagtcgatgga
aatgataaaggcgctgtgagtaaaaactctcatggtaaaagacccggtttcacggttcta
cccccagtcggactcaatgctgagctcagagaatatcagcagttgggattaaattggctg
caatttttaaagaaaaatgaattttcaggcatgctcgccgatgacatgggtctggggaaa
accattcagactctgagtagtatattactcgataaagaggccggaaacttgtccagcccc
tgtttagtggtcgcaccaacgagtctgttagccaactggcttcacgaagccgagaccttt
gcccccgagcttaggctgctgctctggtccggaccaaaacgtcatcgtttacaagataag
attaaggactgtgatctcctgatcactagctatggcaccttgcaacaagatgttgagttg
tgggccaagcaacattttcatctggtgatcttagatgaagcccagaccatcaagaatgtg
cgtagccgaataaatcgcgtggtgggcagcttgtcatcgacacataggctctgcttgacc
ggtacacctttagaaaatcacctgggtgaattatggtcattgtttaatttcttgatgccg
ggtttcctcggtacttatgctcagtttcagcggcactatcaagtacccattgaaaaagag
caagatgatgagcgtcgttgtgcattagtgcaaaggatcgctccgtttatgttacgtcgg
cttaaatctgaagttgccaaagagctgcccgacaagacggttattaatgagtttattagc
ctcactgaaactcagagagatctctatgaaactatccgtttaaccatgtctgaagaggtc
aggaaagcggtttcagtctcaggagtaaagcgtaaccgattagccatcagtaatgcctta
ctcaaactcaggcaggtctgctgccatcccaaattactcaaactcgatcacttacagcaa
tctagccaagacaatgtctatcttgatactggctgggatacatcaaatattgatgtatcc
cataagctgggctcggttaatgggctacaactagccgaagatgtcagcaagctagatact
cgctccggaaaactaaattggcttgccgataagctgcctggcatgctcgaagagggcagg
cgggtgttaatattttcctccttcaccagcatgctgaccttgataggtgaacttttggaa
aacctaggcattagttttgttgagctaacaggtaagagtcgagaccgtggggcattggtt
aagcgttttcagcagcgagaagtaccggtatttttaatcagcttgaaggcgggaggcgcg
ggtttgaatttaaccgctgcagacgtggttattcataccgatccttggtggaatcctgct
gccgagcagcaggccagtgatagggctcatagaattggtcaggacaagtcggtgtttgtc
tataaactcatctgtaaggaaaccgttgaagagaggatacagctgctgcaggaatctaaa
aataacttagctcagagtatttatcagcaagagagtctggctgtttctgatatgacaggg
gatgactggctcgagttacttaagcctataaacttagatgactag
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