Shewanella violacea: SVI_2971
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Entry
SVI_2971 CDS
T01206
Name
(GenBank) outer membrane porin, putative
KO
K09476
outer membrane pore protein F
Organism
svo
Shewanella violacea
Pathway
svo01501
beta-Lactam resistance
svo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SVI_2971
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SVI_2971
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svo02000
]
SVI_2971
01504 Antimicrobial resistance genes [BR:
svo01504
]
SVI_2971
Transporters [BR:
svo02000
]
Other transporters
Pores ion channels [TC:
1
]
SVI_2971
Antimicrobial resistance genes [BR:
svo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, repression of porin OmpF [MD:
M00746
]
SVI_2971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Porin_4
Motif
Other DBs
NCBI-ProteinID:
BAJ02942
UniProt:
D4ZA97
LinkDB
All DBs
Position
complement(3365417..3366622)
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AA seq
401 aa
AA seq
DB search
MKKTLVASALVAVIFVPSVSAIEVYKDDKNAVEIGGFVDARIINTQGVTEIVNGASRINF
GFTREMSDGWKVFTKLEWGVNPFGNSEIVYSSESNFQSKSSDFLNNRLGYVGIAHDVYGS
LTIGKQWSTWYDVVYNTNYGLVWDGNASGTYTYKADGGINGTGRGDDTVQYRNSVGDLSF
GVQVQLKHDSFDITGDPEVIHSVGTGSAAIKASDPTVIASLEYNNTYGGAATYNVTDNLI
FTAGFNIGEFKGAFANGQAINETDSIYGLGAMWGNWNGEGVYAAFNVNKQEYHDTDNLGR
MVPEATGLESLVSYKFNNGIRTFASYNILEAGDDYESAYKGDEFKRQFAVVGVHYVWDAN
TVLYLEGRKDYGNFTSNDAVQEAAMSMSEEDGVGFGVRYIM
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaactctagtagcatcggcattagtagccgttatatttgtcccgtcagtatcg
gcgatcgaagtctataaagatgataaaaatgcagttgagattggtggatttgttgacgca
cgtatcatcaatactcaaggtgttacagaaatcgtcaacggcgcatcacgtatcaacttc
ggttttactcgcgaaatgagtgatggctggaaggtattcactaagctggagtggggcgta
aacccattcggtaacagcgaaatcgtttatagcagtgagagtaacttccaatctaaaagc
agtgactttcttaataatcgtcttggttatgttggtatcgctcatgatgtctacggttcg
cttactataggcaagcagtggagtacatggtacgacgtagtgtataacactaactacggc
ctagtatgggatggtaatgcatcgggtacatacacttataaggcagatggcggaatcaac
ggtactggccgtggtgatgatactgttcaatatcgtaattcagtaggtgatttaagtttc
ggagtacaagtccaacttaagcacgattcatttgatattacaggtgatcctgaagtgatt
catagcgtaggaactggctctgctgcaattaaggcaagtgatcctaccgttatagcctca
cttgaatataacaatacttacggtggtgccgctacttacaatgtgactgacaatttgata
ttcacagcaggtttcaacataggtgagtttaaaggtgcctttgctaatggccaggctatt
aatgaaaccgactctatttacggcttaggtgctatgtggggcaactggaatggcgaaggc
gtttatgccgcttttaacgtcaataagcaagagtatcatgatacagataacttaggtcgc
atggtaccagaagctactggtttagaatcacttgtgtcatacaagtttaacaacggtatt
cgtactttcgcgtcttataacatcttagaagcaggtgatgactatgaatcagcttataaa
ggcgatgagttcaagcgtcaatttgctgtagtaggtgttcattatgtttgggatgcaaac
actgtactttaccttgaaggtcgtaaggattacggtaactttacaagcaacgatgctgta
caagaagctgcaatgtctatgtctgaagaagatggtgtcggtttcggcgtcagatatatt
atgtag
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