Shewanella violacea: SVI_3406
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Entry
SVI_3406 CDS
T01206
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
svo
Shewanella violacea
Pathway
svo00550
Peptidoglycan biosynthesis
svo01100
Metabolic pathways
svo01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SVI_3406 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SVI_3406 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
svo01011
]
SVI_3406 (mrdA)
Enzymes [BR:
svo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SVI_3406 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
svo01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
SVI_3406 (mrdA)
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GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
BAJ03377
UniProt:
D4ZBI2
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Position
3857566..3859422
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AA seq
618 aa
AA seq
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MALRKRVTMHDHAAEAALFKRRALFTFVCVTILLAILLTNLYHLQITSYKDYETRSNDNR
IRVVPVAPSRGLIYDRNGVLLAENQPFYSLELIPEKVKDIPETLIELSRVIPISADEQED
FIKSLKHHRRFKPLTLKNRLTEEQVALFSVNQHKYPGITVVAGLKRYYPYSELLTHALGY
VGRINDRDKSALQRSEQWKDYAGTKDIGKLGIEKYYERLLHGKPGHLEEEVNNRGRTIRT
LKSVAPEPGQDIYLTLDLELQRKAVELLNGRRGSVVAIDPRDGGILALVSSPSYDPNLFV
HGISSKAYGKLLNSSARPLINRATQGQYAPASTVKPLLALLGLDEKIVTSKTRVWDPGFW
QIPGVKHKYRDWQRWGHGWVDVKAALIHSCDTYFYDLAYKTGVNKIAQFMGPFGFGERTG
VDISEESAGIMPSKDWKRLRYNQPWYIGDTISVGIGQGYWTATPLQLANATAILAAKGRR
FTPHFLKSVKNDSTQIDSSDNELPPIKLNMPENWDIVTEAMRDTAHKKRFKDSPYTAAMK
TGTAQVIGVAQDTRYDASAIKEHFRDNALTIAYAPFEAPKIVVAVVLENAGWGGVNAGPV
AKSLLDEYMLRDTVESLK
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
gtggcactaagaaagcgggtaaccatgcatgatcacgctgccgaggctgcgcttttcaaa
cgaagagccttgttcactttcgtctgcgtgactattttattagctatattgctgaccaat
ttataccaccttcagatcacctcctacaaagattatgaaactcgctccaacgacaaccgt
atccgagtagtacccgttgcccctagcagaggcttaatttacgatcgaaatggtgttctg
ctcgccgagaatcagcctttctattcccttgagttaatcccagagaaagtaaaagacatc
cccgagaccttgattgagctcagtcgagtgatcccgatatctgccgatgaacaggaagat
ttcatcaagtccctcaagcaccatagacgttttaaacccttaactctgaagaaccgattg
accgaagagcaggttgccctgtttagtgtcaatcagcacaaataccccggaataacggtt
gtcgcgggccttaaacgctattatccctatagtgaactattgactcatgccctaggatac
gtaggcagaattaacgaccgtgataagagtgccctacaacgcagcgaacagtggaaagat
tacgcgggcactaaagatatcggcaaactaggaatagaaaagtactacgagaggctgctc
cacgggaaaccaggccatctcgaagaggaggtcaataaccgtggccgcaccattcgaacc
ctaaaatccgtagcaccagagccaggccaagacatctatctgaccttagatctagaatta
caacgaaaagccgtggaacttttaaatggcagaaggggttctgtggtcgctatagatccc
cgtgacggaggtatcttggccctagtatctagcccaagttacgatcctaatctgtttgtt
cacggtattagcagtaaagcctatggcaaacttcttaactctagcgcccgccccttgatt
aaccgagcaactcagggacaatatgcgccggcatccacggtcaagcctctgcttgcctta
ctcggtttagatgaaaaaattgtcacctctaagacccgggtctgggacccaggtttttgg
caaatcccaggtgtgaaacacaaataccgtgactggcaacgctggggccatggttgggta
gacgtcaaagccgctttaatccactcatgtgatacttacttttatgatctggcttacaag
acaggcgttaataagattgcccagtttatgggacctttcggtttcggcgaacgtaccggt
gtcgatatctccgaagaatctgctggtataatgccatccaaagactggaagcgcctaaga
tacaatcaaccttggtacataggcgatactatatctgtagggatcggacagggatattgg
acagctaccccgttacaactcgccaatgcgacagctattctcgccgcaaaaggtagacgc
ttcacaccacattttcttaagtcggtcaaaaacgattcgactcagatagacagctccgac
aatgaactgccccctataaaactcaatatgcccgagaattgggacatagttactgaggcc
atgcgagatacggcccataagaagcgattcaaagattcgccctacactgccgctatgaag
acaggtacggctcaagtcataggtgtggcccaagatactcggtatgatgccagtgctatc
aaggagcattttcgtgacaatgccttaaccattgcctacgcccccttcgaagcgcctaaa
attgtggttgctgtggtgcttgaaaatgctggctggggtggcgttaatgctggcccggtg
gccaaatcattactcgatgaatatatgttacgggacacagtggagtcactcaaatga
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