KEGG   Shewanella violacea: SVI_3832
Entry
SVI_3832          CDS       T01206                                 
Symbol
fis
Name
(GenBank) DNA-binding protein Fis
  KO
K03557  Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
svo  Shewanella violacea
Brite
KEGG Orthology (KO) [BR:svo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:svo03000]
    SVI_3832 (fis)
   03036 Chromosome and associated proteins [BR:svo03036]
    SVI_3832 (fis)
   03400 DNA repair and recombination proteins [BR:svo03400]
    SVI_3832 (fis)
Transcription factors [BR:svo03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    SVI_3832 (fis)
Chromosome and associated proteins [BR:svo03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    SVI_3832 (fis)
DNA repair and recombination proteins [BR:svo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      SVI_3832 (fis)
SSDB
Motif
Pfam: HTH_8 Xre-like-HTH HTH_30 DCAF17 Phage_NinH HTH_28 RWP-RK
Other DBs
NCBI-ProteinID: BAJ03803
UniProt: D4ZCQ8
LinkDB
Position
4359442..4359747
AA seq 101 aa
MFDQTTNTETHQLTVGKIETANGTIKPQLLRDAVKRAVTNFFAQMDGQEAEEVYEMVLSE
VEAPLLDIIMQHTRGNQTRAANMLGINRGTLRKKLKKYGMN
NT seq 306 nt   +upstreamnt  +downstreamnt
atgtttgatcagactactaacacagaaactcatcagcttacagttggcaaaatcgaaaca
gctaacggtactattaagcctcagttactacgtgacgctgtaaagcgcgctgtaacaaac
ttcttcgctcagatggacggacaagaagctgaagaagtatatgaaatggtgttgagcgaa
gttgaagctcctctgctagatatcatcatgcagcacactcgcggtaaccagactcgtgcg
gcgaacatgctaggtatcaaccgtggtactctgcgtaagaaattgaaaaagtacggcatg
aactaa

DBGET integrated database retrieval system