Shewanella violacea: SVI_3832
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Entry
SVI_3832 CDS
T01206
Symbol
fis
Name
(GenBank) DNA-binding protein Fis
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svo03000
]
SVI_3832 (fis)
03036 Chromosome and associated proteins [BR:
svo03036
]
SVI_3832 (fis)
03400 DNA repair and recombination proteins [BR:
svo03400
]
SVI_3832 (fis)
Transcription factors [BR:
svo03000
]
Prokaryotic type
Helix-turn-helix
Other families
SVI_3832 (fis)
Chromosome and associated proteins [BR:
svo03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
SVI_3832 (fis)
DNA repair and recombination proteins [BR:
svo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
SVI_3832 (fis)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HTH_8
Xre-like-HTH
HTH_30
DCAF17
Phage_NinH
HTH_28
RWP-RK
Motif
Other DBs
NCBI-ProteinID:
BAJ03803
UniProt:
D4ZCQ8
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All DBs
Position
4359442..4359747
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AA seq
101 aa
AA seq
DB search
MFDQTTNTETHQLTVGKIETANGTIKPQLLRDAVKRAVTNFFAQMDGQEAEEVYEMVLSE
VEAPLLDIIMQHTRGNQTRAANMLGINRGTLRKKLKKYGMN
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatcagactactaacacagaaactcatcagcttacagttggcaaaatcgaaaca
gctaacggtactattaagcctcagttactacgtgacgctgtaaagcgcgctgtaacaaac
ttcttcgctcagatggacggacaagaagctgaagaagtatatgaaatggtgttgagcgaa
gttgaagctcctctgctagatatcatcatgcagcacactcgcggtaaccagactcgtgcg
gcgaacatgctaggtatcaaccgtggtactctgcgtaagaaattgaaaaagtacggcatg
aactaa
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