Streptomyces vietnamensis: SVTN_38010
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Entry
SVTN_38010 CDS
T03586
Symbol
ligB
Name
(GenBank) ATP-dependent DNA ligase
Organism
svt
Streptomyces vietnamensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_A_N
RNA_ligase
PNKP_ligase
Motif
Other DBs
NCBI-ProteinID:
AJF69206
UniProt:
A0A0B5I9K9
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Position
8580182..8581729
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AA seq
515 aa
AA seq
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MLLARVAEVSREVAATSARSRKIALLAELFAQAGPEESPLVIAYLSGRLPQGRIGVGWSI
LKGVVPPAVPPAERAALTLGQVDRTMAELAVVSGAGARGERTRLVHALMAAATHDEQELL
LRLLAGEVRQGALDAIALEGVARAAGVPAAELRRAVMLEGSLPPVAQAVLAEGAPGLDRF
TLRVGNPVQPMLAHTAGSVAEAIAALGACAVEEKLDGIRIQVHRRGDDVRVHTRSLDDIT
DRLPEVVATARAVAADAFILDGEVIALDPGTGRPVSFQSVAGRVGSRVDVAGAHAALPLT
PVFFDVLVVDGEGLIDRSGVERHAVLARLLPESQRVRRTVVLDPADPAQTEAAERFYADT
LARGREGVLVKALEAPYVAGRRGRTWLKVKPVRTVDLVVLAVERGHGRRTGLLSNLHLGA
RTADGGFAMLGKTFKGLTDEMLRWQTERLGELAVSDDGFTVRVRPELVVEVAYDGLQSST
RYPAGVTLRFARVVRYRPDKRASEADTVERITEGR
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgctccttgcgcgtgtcgcggaagtgtcccgggaggtcgccgcgacctccgcgcgctcg
cgcaagatcgctctgctggccgaactgttcgcccaggccgggcccgaggagagcccgctc
gtcatcgcgtatctgtccgggcggctgccgcaggggcggatcggggtcgggtggagcatc
ctcaagggcgtcgtcccgccggccgtgccgcccgccgagcgagccgctcttacgctcggg
caggtcgacaggacgatggcggagctggccgtcgtgtccggcgccggagcccgcggcgag
cggacccggctcgtccacgcgctgatggcggccgccacccacgacgaacaggaactgctg
ctgcggttgctggccggcgaggtgcgtcaaggagccctcgacgccatcgccctggagggc
gtcgcgcgggccgccggggtccccgccgccgaactgcggcgcgccgtgatgctcgaagga
tcgctgcccccggtcgcccaggccgtgctggccgagggtgcccccggcctcgaccggttc
acgctgcgggtcggcaaccccgtgcagcccatgctcgcgcacacggccggttccgtcgcc
gaggcgatcgccgccctgggggcgtgcgcggtcgaggagaagctcgacggcatacggatc
caggtgcaccggcgcggtgacgacgttcgcgtgcacacccgctcgctcgacgacatcacc
gaccgcctccccgaggtggtcgcgaccgcccgagccgtagcggccgacgcgttcatcctg
gacggcgaggtgatcgccctcgatcccggcacggggcgcccggtgtccttccagtcggtg
gccggccgggtcggctcccgcgtcgacgtcgccggtgcgcacgcggcccttcctctcacg
ccggtcttcttcgacgtcctcgtggtggacggcgaaggcctgatcgaccggtcgggagtg
gagcggcacgccgtcctcgcccgactgctgccggagtcccagcgggtccgccgcacggtc
gtcttggatccggccgatcccgcgcagaccgaggccgccgagcggttctacgcggacacc
ctggcccggggacgcgagggcgtgctggtcaaggcgttggaggcgccctacgtggccggt
cgcagggggcgcacctggctgaaggtgaaacccgtccgcaccgtcgacctcgtcgtgctc
gccgtggagcggggccacggccgcagaaccgggctgctctccaacctccacctcggcgcg
cggaccgccgacggaggcttcgccatgctcggcaagaccttcaaggggctcacggacgag
atgctccgctggcagaccgagcggctcggcgaactcgccgtgtcggacgacggattcacc
gtgcgcgtgcggcccgagctcgtcgtggaggtcgcgtacgacgggctccagtcctcgacg
cgctacccggcgggtgtcacgctccgcttcgcccgggtcgtgcgctaccgccccgacaag
cgggcctcggaggccgacaccgtcgagcggatcaccgaaggacgctga
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