Streptomyces violaceoruber: B1H20_03415
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Entry
B1H20_03415 CDS
T05124
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
svu
Streptomyces violaceoruber
Pathway
svu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
svu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B1H20_03415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svu03400
]
B1H20_03415
Enzymes [BR:
svu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
B1H20_03415
DNA repair and recombination proteins [BR:
svu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B1H20_03415
Prokaryotic type
B1H20_03415
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ARF65995
UniProt:
A0A1V0UL57
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All DBs
Position
complement(773674..774357)
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AA seq
227 aa
AA seq
DB search
MTDIDLLPESWRGVLGEELQKPYVKELADFVEEERAKGPVYPPREQVFAALDATPYDKVK
VLVLGQDPYHGEGQGHGLCFSVRPGVRTPPSLRNIYKEMHQELGLPIPDNGYLMPWAEQG
VLLLNAVLTVRGGEANSHKNKGWEKITDAVIRAVADRPDPAVFVLWGNYAQKKLPLIDEE
RHIVVKGAHPSPLSAKKFFGSRPFTQINEAVAAQGHQPIDWRIPDLG
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatatcgacctgctgcccgagtcctggcgcggtgtcctcggcgaagaactgcag
aagccgtacgtcaaggagctggcggacttcgtcgaggaggagcgggcgaaggggcccgtg
tacccgccgcgcgagcaggtcttcgccgccctggacgccactccgtacgacaaggtgaag
gtcctggtcctcggccaggacccgtaccacggcgagggccagggccacggcctgtgcttc
tccgtgcggcccggcgtcaggacgcccccgtcgctgcgcaacatctacaaggagatgcac
caggagctcgggctgccgatcccggacaacggctatctgatgccctgggccgagcagggc
gtcctcctgctcaacgcggtgctcaccgtccggggcggcgaggccaactcccacaagaac
aagggatgggagaagatcaccgacgccgtgatccgcgccgtcgccgaccggcccgacccg
gccgtcttcgtgctctggggcaactacgcgcagaagaagctgccgctgatcgacgaggag
cgccacatcgtggtgaagggcgcccacccctccccgctctccgccaagaagttcttcggc
tcccgccccttcacgcagatcaacgaggccgtggccgcccaggggcaccagccgatcgac
tggcgcatccccgacctcggctga
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integrated database retrieval system