Streptomyces violaceoruber: B1H20_25130
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Entry
B1H20_25130 CDS
T05124
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
svu
Streptomyces violaceoruber
Pathway
svu00300
Lysine biosynthesis
svu00470
D-Amino acid metabolism
svu01100
Metabolic pathways
svu01110
Biosynthesis of secondary metabolites
svu01120
Microbial metabolism in diverse environments
svu01230
Biosynthesis of amino acids
Module
svu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
svu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
B1H20_25130
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
B1H20_25130
Enzymes [BR:
svu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
B1H20_25130
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
APS_kinase
Motif
Other DBs
NCBI-ProteinID:
ARF64297
UniProt:
A0A1V0UGP4
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All DBs
Position
5720796..5722187
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AA seq
463 aa
AA seq
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MSRSAHPAGPRHADVLPEGHYSAPAADLNALDEKVWSRTVTRDADGALTVGGITVARLAE
EFGTPAYFLDESDFRARCRAWADAFGPDADVFYAGKAFLSRAVVRWLTEEGLNLDVCSGG
ELTTALDAGMPAERIAFHGNNKTVAEIERAVAAGVGRIVLDSFQEIVRVAHIAQRHGVRQ
RVQIRVTVGVEAHTHEFIATAHEDQKFGIALADGQAAEAVRRALSLDGLDLIGVHSHIGS
QIFDMAGFEVSARRVVQLLAEIRDEHGVELPEIDLGGGLGIAYTSDDDPREPHEIAKALS
DIVTRECEAAKLRTPRISVEPGRAIVGPTAFTLYEVGTIKPLEGLRTYVSVDGGMSDNIR
TALYDAEYSVALVSRTSDAEPMLVRVVGKHCESGDIVVKDAFLPADLAPGDLIAVPATGA
YCRSMASNYNHALRPPVVAVRDGEARVIVRRETEEDLLRLDVG
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctccgcacaccccgcaggcccccgtcacgccgacgtcctccccgagggccac
tactccgcgcccgccgccgacctgaacgccctcgacgagaaggtctggtcccgcaccgtc
acccgcgacgcggacggcgccctcaccgtcggcgggatcaccgtcgcccgcctcgccgag
gagttcggcacccccgcctacttcctcgacgagagcgacttccgggcccgctgccgcgcc
tgggcggacgccttcggcccggacgccgacgtcttctacgccggcaaggcgttcctctcc
cgcgccgtcgtgcgctggctcaccgaggaggggctcaacctcgacgtgtgctccggcggg
gagctgaccaccgctctcgacgccggtatgcccgccgagcgcatcgccttccacggcaac
aacaagaccgtcgccgagatcgagcgggccgtcgcggccggcgtcgggcggatcgtgctc
gactccttccaggagatcgtccgcgtcgcccacatcgcccagcgccacggcgtccgccag
cgggtccagatccgggtcaccgtcggcgtcgaggcccacacccacgagttcatcgccacc
gcgcacgaggaccagaagttcggcatcgcgctcgccgacgggcaggccgccgaagccgtc
cgccgggccctctccctcgacgggcttgacctcatcggcgtccactcgcacatcggctcg
cagatcttcgacatggccggcttcgaggtctccgcccggcgcgtggtccagctcctcgcc
gagatccgcgacgagcacggcgtggaactccccgagatcgacctcggcggcggcctcggc
atcgcctacacctccgacgacgacccccgcgagccgcacgagatcgccaaggcgctcagc
gacatcgtcacccgcgagtgcgaggccgcgaagctgcgcaccccgcgcatctccgtcgag
ccgggccgcgccatcgtcggacccaccgcgttcaccctctacgaggtgggcacgatcaag
cccctggaagggctgcggacgtacgtcagcgtcgacggcggcatgtccgacaacatccgc
accgcgctgtacgacgccgagtacagcgtcgccctcgtctcccgcacctccgacgccgag
ccgatgctcgtccgcgtcgtcggcaagcactgcgagagcggcgacatcgtggtcaaggac
gccttcctccccgccgacctcgcccccggcgacctgatcgccgtccccgccaccggcgcg
tactgccgttccatggcgagcaactacaaccacgcgctgcgcccgccggtcgtcgcggtc
cgcgacggcgaggcgcgcgtcatcgtccggcgcgagacggaggaagatctcctgcgcctc
gatgtcggctga
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