Shewanella woodyi: Swoo_0451
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Entry
Swoo_0451 CDS
T00676
Name
(GenBank) protein of unknown function DUF1566
Organism
swd
Shewanella woodyi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1566
TSP3_bac
Fib_succ_major
Motif
Other DBs
NCBI-ProteinID:
ACA84749
UniProt:
B1KQ94
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All DBs
Position
complement(555916..559374)
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AA seq
1152 aa
AA seq
DB search
MNVLTRLSILLIMITGLGACGGSDKSTTPEPEKPNPVIEPKTELKGIPDSFQVKACIDED
ADFTCDATPVAITEVYKGIDIDKLAPDARVLIELAPPEATGIGSFIAFEGKRFMSFPVGE
EEASPFNLLALGVVQYAQELGEDWCCGHAIPLNLKEAKSYLAQNFKLDGSGQQNEAILQA
FNSNLEQLGGNGLSLKQAYDADIKAMAESLVDLTLHSQSICDRVPEYCEGNPDDPYPPID
LSNIVPCITAYDGGSCVAQIPKLQVESTVTDEMFRLTQKEAGNIAYNIRSREKEPLPFEK
AFEQLTCKDDEEKQVFMYGVGDNFATTNIENTSPSAALTAWLGTVPNNLVHPYDFDASIS
PANPNIFADTLSNLPSDLTNGLLVMGLKERGFTLSDTPNYFDIFAIGDATNISSNANVSG
TVSDIRSSWQSVSPNVYFENLQNIQNQAGTQSLLDKLHAGQTDLDLVMMPTTNVDFVAVA
ACRVKAPQKPIETPVKEVISVLTEKFTCNAEQGETYYEIVGGEPDDFTPGSDQNTPSTAL
SSLTGTLVTYDQIEAKDSTFIDTLALPSGSSITKAQFMINARATSPSAANDKVFLANTPL
NNMVTGFTTTAPGALVTQWPNGTLNGGAAYIIDGLFNIPSLPTTPNLLTILNSANASGSG
LDILVSENTEVDTTLLQLCINTGDQPCVDTDGDGYCDEEEKDAGSDPTNPDSTPIDLDGD
GALNDDDCDPNDPTVTDQCNEVIYTDVLPESCSEYVTVDLSLANSWANSAGNPPVVNNVF
DGTQYQGIVWDGALSWFDFGSASNVTHKLNQDFCSCGGGKVVIDEFKSDNMGYIDLNNLT
NQTANRIVSRTQYSQSTMASWGPSESGSNTFSGTGNGVDFNLELGVQNVSGPSGGAVKGR
LEFIGHLGACTTQDVVDNSGGTGTVGGVGPAINVGSIAVTHELLSNLPVIQETTAPFIKL
DDNGNPLAEQTLPWSDTGSESEGTQWSCVKDVATNLIWEVKRNSNGIKKESLHDADDVYA
WFDPDPTTNGGFSGANTSGNFCFGFDANDSSTFCNSQRFEDSVNNADFCGSADGWRLPTI
EELEGLVDTNYATPMINGAYFPNTPLQSAFWSSTTNPNDSNKAEHLFFYNGQSYNSTSKT
YTAASVRLVRDQ
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttttaacaagattaagtattttacttatcatgataacgggactgggggcgtgt
ggaggcagcgataaaagcaccacgccagaaccagagaagcccaatccagtcattgaaccc
aaaacagaattaaaagggatccccgattcatttcaggtaaaagcctgtatagatgaagat
gcagattttacctgcgatgcaaccccagtggcgatcaccgaagtttacaaagggatcgac
attgataagctcgcgccagacgcacgagtattaattgagctagcgccacctgaagcaaca
ggcatagggagttttatcgctttcgagggtaaacggtttatgtcgttcccagtaggagaa
gaggaagcatcaccattcaacctactggctcttggtgtcgtgcaatatgcacaagagcta
ggagaggattggtgctgtggtcacgcaatcccattaaacctaaaggaagctaaaagttat
ttagcgcaaaactttaagcttgatggcagtggtcagcaaaatgaagccatattgcaagca
ttcaactcaaaccttgagcagttaggtggcaacggcttatcgttaaaacaagcctatgat
gctgacattaaagcgatggccgagtcattagtggatctcacccttcattctcaaagtatc
tgtgaccgagtacctgagtattgcgaaggcaacccagatgacccatatccgccaatcgat
ttatcaaacatagtgccctgtattaccgcctatgatggtggctcttgtgttgcacaaata
cctaaactccaagttgaatcaacagtaaccgatgagatgtttcgcttgacccaaaaagaa
gccggtaacatcgcttacaacatcaggagccgtgaaaaagaaccgcttccctttgaaaaa
gcgtttgagcaattaacatgtaaagatgacgaagaaaaacaggtctttatgtatggtgta
ggggataatttcgctacaacgaacatagaaaatacatccccatctgctgcattgaccgct
tggttaggaactgtacccaataacctagttcatccctatgattttgatgccagcatatcc
cctgcgaaccccaatatatttgcagacaccttaagtaatttacccagtgacctcaccaat
ggtctgttggttatggggctaaaagagcgtggttttacgctttcagatacccctaattac
ttcgatattttcgccattggtgatgcaacaaacataagctcaaacgccaatgtcagcggg
acagtgagtgatatcagaagcagttggcagtctgtctcacccaatgtatattttgaaaac
ttacaaaacatacagaaccaagcggggacccagtcgcttctcgataaactacacgcaggg
caaaccgatctggatctggtgatgatgccaaccaccaatgttgattttgttgccgtcgct
gcctgccgtgtaaaagcgccacaaaaaccgatagaaacaccagtcaaagaggtgatctct
gttctaacagagaagtttacttgtaatgcagaacaaggcgagacttactacgaaatagta
ggcggtgagcctgatgatttcacaccaggttctgatcaaaataccccaagtaccgctttg
tcatcactcactggcacgcttgttacctacgatcaaattgaggcaaaagacagcactttt
attgacacgttagctttacctagtggcagcagtatcactaaagcccagtttatgatcaat
gcacgagcaaccagcccaagtgccgccaacgataaagtgtttttggccaatacaccgcta
aataatatggtcacagggtttacaacaaccgcaccgggagcattagtgactcaatggcct
aatggcacgctaaacggcggcgcggcgtatattattgatggtctatttaatattcccagc
ctaccgacaacacctaacctacttaccattctaaactctgccaacgcaagtggatcagga
cttgatattttggtctctgaaaatacagaggtcgataccacgttacttcagctatgtatc
aatacaggggatcaaccttgtgtagataccgatggtgatggctattgtgacgaagaggag
aaagatgctggtagcgatcctaccaatccagactcgactcctatcgatttagatggtgac
ggcgctctcaatgatgatgattgtgatccaaacgaccccacggtaactgaccagtgtaat
gaagtcatttacactgacgtattaccagagagctgcagtgagtatgtgacggtagatctc
agccttgcgaactcttgggcaaacagtgcggggaaccctcctgttgtgaataatgtgttt
gatggtactcagtaccaaggcattgtctgggatggtgctttgtcatggtttgattttggt
agcgcatcaaacgtcacccacaagttaaatcaagacttttgctcatgtggtggcggcaag
gtcgttatcgatgagtttaagtcagacaatatgggttacatcgacttaaacaacctcacc
aatcaaacagctaaccgaatcgtttctcgtacccagtatagccagtcaacaatggcatct
tggggcccaagtgaaagtggcagtaacactttttcaggtaccggtaatggcgttgacttt
aatcttgaacttggcgttcaaaatgtctcaggcccaagtggtggagcggttaaagggaga
cttgaatttataggtcatttaggtgcttgtacgacacaggatgtggtcgacaactctggt
ggaacaggcactgttggcggcgttggacccgctattaatgttggatcgatagcagtaacc
catgagcttctgtcaaacctccctgtgatccaagaaacaacggcgccctttatcaagcta
gacgataatggtaacccacttgcagagcagacacttccatggagcgatacaggtagtgaa
agtgagggcacccagtggtcatgtgttaaagatgtcgccaccaaccttatctgggaagtg
aaacgcaacagcaacggtataaagaaagagagcttgcatgacgccgatgatgtttatgct
tggtttgatcctgacccgacaaccaatggtggcttctcaggtgcaaacacttcaggcaat
ttttgcttcggttttgatgcaaatgacagtagcacattctgcaattcgcaacgctttgag
gatagtgtcaataacgctgatttctgtggttcggccgatggttggcgactccccacaatt
gaggagttagaaggcttagtagacaccaattacgccacgccaatgatcaatggtgcttac
ttccctaatacccctctacagtcagctttttggtcaagtaccaccaaccctaatgactca
aataaagcagagcatctgtttttctataatgggcaaagttacaacagtacttcgaaaaca
tacactgcagcatcggttcgcttggttagagatcagtag
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