Shewanella woodyi: Swoo_1541
Help
Entry
Swoo_1541 CDS
T00676
Name
(GenBank) radical SAM enzyme, Cfr family
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
swd03009
]
Swoo_1541
Enzymes [BR:
swd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
Swoo_1541
Ribosome biogenesis [BR:
swd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Swoo_1541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RlmN_N
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
ACA85829
UniProt:
B1KKI9
LinkDB
All DBs
Position
1919107..1920228
Genome browser
AA seq
373 aa
AA seq
DB search
MSEKKINLLDLDRKGLRALFTEMGEKPFRADQLMKWIYHFGVSDFDEMNNINKALRAKLN
ARCEIVAPEISSFQKSEDGTIKFAINVGQGQEVETVYIPEDDRATLCVSSQVGCALECTF
CSTAQQGFNRNLTVSEIIGQVWRVADFIGFVKETGERPITNVVMMGMGEPLLNLKNVIPA
MDIMLDDFGFSLSKRRVTVSTSGVVPALDKLGDALDVALAVSIHAPNDELRDVLVPVNKK
YPLEEFLGGIRRYIAKSNANRGRVTVEYVMLDHINDSTDQAHELAKLMKDTPCKINLIPF
NPYPGSPYGRSSNSRIDRFSKVLMEYGLTVIVRKTRGDDIDAACGQLAGDIRDRTKRLAK
KRMQDSQISVTIN
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaagaaaatcaatttattggatcttgaccgtaaagggttaagagcattattc
actgaaatgggtgagaagccgtttcgtgccgatcaattgatgaagtggatttatcatttt
ggcgtcagtgactttgacgagatgaataatattaacaaagcgctgcgtgcgaagcttaat
gcccgctgtgagattgttgcgcctgaaatttccagctttcaaaagtctgaagatggcacc
attaagtttgctattaatgttggtcaaggccaggaagttgaaaccgtttacattccagaa
gatgacagagcaaccttgtgtgtttcatcacaagtgggttgtgctttagagtgcaccttc
tgctcgactgctcagcagggctttaatcgtaacttaacggtttctgaaattattggtcaa
gtttggcgtgttgcggactttatcggttttgtgaaagagactggcgaacgtcctattact
aacgtcgttatgatgggaatgggtgagccactactgaacctaaagaacgtgatccctgca
atggatatcatgttagatgattttggtttcagcctctctaagcgccgagtgacggtatca
acttcaggggttgtaccagcattggataagttaggtgatgctttagatgttgctttggcg
gtaagtattcatgctcctaatgacgaactgcgtgacgtgttggttccagtcaataaaaag
tatcctttagaggagtttttaggtgggatccgccgttatattgctaagtcgaacgctaac
cgaggacgtgtaactgttgagtatgtcatgttagatcatatcaatgacagcacagaccaa
gcccatgaattagctaaattaatgaaagataccccctgtaagattaaccttattccgttt
aatccttaccctggttcaccttatggtcgctcctctaattctcgtatcgatcgtttctcc
aaagtattgatggagtacggtctaacagtgattgttcgcaagactcgtggtgacgatatt
gatgctgcttgtggtcaattggccggtgatatcagagacagaactaagcgtttagcgaaa
aaacgcatgcaagatagccaaatatcggtcacaataaactaa
DBGET
integrated database retrieval system
