Shewanella woodyi: Swoo_1943
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Entry
Swoo_1943 CDS
T00676
Name
(GenBank) MscS Mechanosensitive ion channel
KO
K16052
MscS family membrane protein
Organism
swd
Shewanella woodyi
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swd02000
]
Swoo_1943
Transporters [BR:
swd02000
]
Other transporters
Pores ion channels [TC:
1
]
Swoo_1943
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
ACA86227
UniProt:
B1KQI8
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Position
2389849..2391450
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AA seq
533 aa
AA seq
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MRFFCISIMLFILGLLGPSLALADTANLISGANAAEEPHTALSVHQQFQYKDKHNRDTPK
GTLEGFFNAAYEQDFELASQYLDLRYLPENMSQEKGPEYATMLQAIIDRNVWINLEELDD
TPQGATNDSLPSYRDIFGRIKVESGEVMLLLQRVPSDKRSIWKISNATVAKIPELYSQLG
YGPIVEWFVETIPEGRLFKINLWEWALLLTYLLAAFIIVIPITLLIKLVLLKSTLSLKVE
LGYIASGPLRFFLAVVLDRAWIAQSSISPHALEAINTGFLLLISVIWLVWSSLGIMSAGL
KQRLIAQEHQQGASLLGPLTNFVRVIFIAIAFLVWLEFLGFNASAIVAGMGIGGVAIALA
SKQSIENFIGTITLYSAAPIKVGNICQFGSIKGTVEEIGLRCTQIRTLDRTLIHVPNAKL
AEMEIENISEREKIRFKADIRLDYLTRSEQLKAIISDITGMLENHELIDEDPLRVTFQGF
GLHGLQVNIFAYVGTTSFPTYQKVAQELHLAIMDIVETHGSRIIPVAPIAAKI
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttttttgtatctctatcatgctttttattttaggtttgctcggcccttcgttg
gcgctagctgatactgcaaacttaatatcaggggctaatgcagcggaagaacctcatact
gcattgagtgtccatcagcagtttcaatataaagataagcataatagagatacgccgaaa
ggaacactagaggggttcttcaatgccgcttatgagcaggattttgagttggcgtcacag
tatctggatctgcgttacctgccagaaaatatgtcacaagagaaaggtcctgaatatgcc
accatgttgcaggcgattattgacagaaatgtatggatcaaccttgaggaattagatgat
acacctcaaggggcaactaatgatagtttgccctcatacagagatatctttggccgaata
aaggtggagagtggtgaggtgatgctactacttcaacgagtgccctctgacaagcgttcg
atttggaagatatcgaatgccactgttgctaaaattccagagctttatagtcaactcgga
tatggacctattgttgagtggtttgttgagaccattccagaagggcgactgtttaagatc
aatctgtgggagtgggcgttactgctcacatacttgctggctgcatttattattgtgatt
ccaatcaccttgttgattaagttagtgctgttaaagtctactcttagtctcaaggtggag
cttggctatattgcttcaggcccattgcgtttttttcttgctgtggtgcttgatagggct
tggatagcccaaagcagtatctctcctcatgctctggaggctattaataccggtttttta
ctgctgatctcggttatatggttggtatggtcttcattaggtattatgagtgcaggttta
aagcagcgtttaatcgctcaagagcatcagcaaggtgcatctttattggggcctttgacg
aattttgttcgagtgatttttattgccatcgcttttttggtttggctagagtttttagga
tttaatgccagtgcaatcgtggcaggaatgggcattggtggtgttgcaattgcgctcgct
tctaaacagtcaattgaaaactttattggaaccatcactctttattctgctgccccaatt
aaagtgggcaatatttgtcagtttggctccattaaagggacggttgaggagattgggtta
cgttgtacgcaaattcgtacattagacagaaccttaattcatgtgcctaatgcaaaatta
gctgagatggagattgaaaatatctctgagcgtgagaagattcgctttaaagctgatatt
cggctcgattatttaacccgttcagagcagctaaaggctattatttcagatattactgga
atgctagaaaaccatgagctgatagatgaagaccctttgcgagttacctttcaaggtttt
ggattacacgggcttcaagtcaatatttttgcgtatgttggaacaaccagttttccgact
tatcagaaagttgctcaggagttacatctggcgatcatggatatcgttgagacccatggt
tctagaattattcctgttgcgcctatagctgctaaaatttaa
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