Rhizorhabdus wittichii RW1: Swit_0483
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Entry
Swit_0483 CDS
T00538
Name
(GenBank) Serine-type D-Ala-D-Ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
swi
Rhizorhabdus wittichii RW1
Pathway
swi00550
Peptidoglycan biosynthesis
swi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Swit_0483
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
swi01002
]
Swit_0483
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
swi01011
]
Swit_0483
Enzymes [BR:
swi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Swit_0483
Peptidases and inhibitors [BR:
swi01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
Swit_0483
Peptidoglycan biosynthesis and degradation proteins [BR:
swi01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Swit_0483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
ABQ66851
UniProt:
A0A9J9H8E2
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All DBs
Position
517912..519090
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AA seq
392 aa
AA seq
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MTRSKIALLSAVFLMAAIPAEAAAPPFDTPAPVAFLKDLSSGAILYAKNPDLRMPPASMA
KMMTVYVAFDLIQKGELKLDAMATVRPETWKQWHGPAAGSTMFLSPGEQVSVANLLFGIV
TLSGNDACVVLAEHISGTEQAFVALMNRRAKEMGLTNSHFGTSNGWPDGGATYVTARDLA
TLAEKTIEEHPKLYKTFYSRPSFTWGKTMGGGQDITQANRDPLLGRVAGADGLKTGHTEE
AGFGFTGSAEQNGRRLVMVLSGLTSFNQRIDQSVSFMNWGFRSWQSKPVVPKGRKVQTAE
VQLGDEREVGLVAPKDLVVTVPAGLGSDLKTKVVYQGPIKAPFKKGDHIADLVVSGPDMV
PQKLPLVADQDVGTAGFFNRMMAGLRWLFGLA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcagcaagatcgccctgctttcggctgttttcctgatggcggccatcccggcc
gaggccgccgcgccgccgttcgacacgcccgcgccggtcgcgttcctcaaggatctttcg
tcgggcgcgatcctctacgccaagaatcccgacctgcgcatgccgccggcgtcgatggcg
aagatgatgaccgtctatgtcgccttcgacctgatccagaagggcgagctcaagctcgac
gccatggccaccgtccggcccgagacgtggaagcagtggcacggcccggcggcgggatcg
accatgttcctgtcccccggcgagcaggtgagcgtcgccaacctgctgttcggcatcgtc
accctgtcgggcaacgacgcctgcgtcgtgctggccgagcatatctcgggcaccgagcag
gcgttcgtcgcgctgatgaaccgccgcgccaaggagatggggctgaccaacagccatttc
ggcacgtcgaacggctggcccgacggcggcgccacctacgtcaccgcgcgcgacctcgcg
acgctcgccgagaagacgatcgaggagcaccccaagctctacaagaccttctacagccgc
cccagcttcacctggggcaagacgatgggcggcgggcaggacatcacccaggcgaaccgc
gacccgctgctcggccgcgtggcgggcgccgacggcctcaagaccggccataccgaggag
gccggcttcggcttcaccggctcggccgagcagaatggccgccgtctcgtcatggtcctg
tcgggactgacctcgttcaaccagcggatcgaccagtcggtctccttcatgaactggggc
ttccgctcctggcagtcgaagccggtcgtgccgaagggccgcaaggtgcagactgccgag
gtccagctcggcgacgagcgcgaggtcggcctggtcgcgccgaaggacctggtcgtcacc
gtcccggccgggctgggttcggacctcaagaccaaggtggtctatcaggggccgatcaag
gcgccgttcaagaagggcgaccatatcgccgacctcgtcgtcagcggtcccgacatggtg
ccgcagaagctgccgctcgtcgccgaccaggacgtcggcacggccggcttcttcaaccgg
atgatggcgggcctgcgctggctgttcggcctcgcctga
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