Rhizorhabdus wittichii RW1: Swit_2705
Help
Entry
Swit_2705 CDS
T00538
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
swi
Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
swi03009
]
Swit_2705
Enzymes [BR:
swi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
Swit_2705
Ribosome biogenesis [BR:
swi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Swit_2705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF6494
TMEM232
Motif
Other DBs
NCBI-ProteinID:
ABQ69061
UniProt:
A0A9J9HCH9
LinkDB
All DBs
Position
complement(2989683..2990543)
Genome browser
AA seq
286 aa
AA seq
DB search
MRPPQKTSPGKALPPPKRGRRQARTAPAAPANPHPARAAAKGGREPQRIAKLLARAGIAS
RREIERMIAEGRVAIDGAAIDTPATLLTSLKGVTVDGKPVAAPEATRLFLFHKPKGLLTT
ERDPKGRPTIYDRLPAGLPRVMPVGRLDLNTEGLLLLTTDGEFKRQLELPSTGVERIYRA
RCYGTVHQEQLEALIEGIEIDGVRYGSIDANMERRTGANVWIEMKLREGKNREVRRVLEH
LGLEVSRLIRIAYGAFELGDLQPGEVGEIAQHQLVAFRKTLKGGRE
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcccccccagaagacttcgccgggcaaggccctgccgccgcccaagcgcggccgc
cgccaggcgcgcaccgcgcccgccgccccggccaacccgcatcccgcccgcgccgccgcc
aagggcggacgcgagccgcagcgcatcgccaagctgctcgcccgcgccggcatcgcctcg
cgccgcgagatcgagcggatgatcgccgagggccgcgtcgcgatcgacggcgccgcgatc
gacacccccgcgacgctgctcacctcgctcaagggcgtgaccgtcgacggcaagccggtg
gccgcgccggaggcgacccgcctgttcctgttccacaagcccaaggggctgctcaccacc
gagcgcgaccccaaggggcggccgaccatctatgaccggctgcccgccgggctgccgcgg
gtgatgccggtcggccggctcgacctcaacaccgaggggctgctgctgctgaccaccgac
ggcgagttcaagcgccagctcgaactgccctcgaccggggtcgagcggatctatcgcgcg
cgctgctatggcaccgtccatcaggagcagctcgaggcgctgatcgaggggatcgagatc
gacggcgtccgctacggatcgatcgacgcgaacatggagcgccgcaccggcgccaatgtc
tggatcgagatgaagctgcgcgagggcaagaatcgcgaggtgcgccgcgtgctcgagcat
ctcggcctcgaagtgtcgcggctgatccgcatcgcctatggcgcgttcgagctcggcgat
ctccagccgggcgaggtcggcgagatcgcccagcaccagctcgtcgccttccgcaagacg
ctcaagggcggccgcgaatga
DBGET
integrated database retrieval system
