Shewanella piezotolerans: swp_0407
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Entry
swp_0407 CDS
T00791
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
swp
Shewanella piezotolerans
Pathway
swp00300
Lysine biosynthesis
swp00470
D-Amino acid metabolism
swp01100
Metabolic pathways
swp01110
Biosynthesis of secondary metabolites
swp01120
Microbial metabolism in diverse environments
swp01230
Biosynthesis of amino acids
Module
swp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
swp_0407
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
swp_0407
Enzymes [BR:
swp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
swp_0407
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1955
Motif
Other DBs
NCBI-ProteinID:
ACJ27239
UniProt:
B8CHW3
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All DBs
Position
424431..425675
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AA seq
414 aa
AA seq
DB search
MDHFIYQAEELYAEQCQVAELAKQHGTPLYIYSRATLERHWYAFDNAVANHPHLICYAVK
ANSNIAVLNVLARLGSGFDIVSGGELARVIEAGGDPAKVVFSGVGKTVAEMELALEIGIY
CFNVESAAELEQLSVVAQRMNKVAPVSLRINPDVDAGTHPYISTGLKENKFGIAMEEAEA
IFLRAKELPCIEIKGVDCHIGSQLTEIKPFLDAMDRMLALIDRLAELGIEIKHFDVGGGL
GVTYDDELPPQPDVYAAALLERLGGRDLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRF
ALVDGAMNDLIRPSLYSAWQKIIPAIDRGGETLNYDVVGPVCETGDFLGKDRQLNIAAGD
YLAIRSSGAYGFTMASNYNSRPRAAELMVDGDNAYVIREREKLAQLWQGEQLLP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
ttggatcattttatatatcaagcagaagaactctacgccgaacaatgccaggttgcagaa
ttagctaagcaacatggcacgcctctttacatctattctcgagcgacattagagcgtcat
tggtatgcttttgataatgcagtcgctaatcatccacacctcatctgttatgcggttaag
gcaaactccaatattgcagtgttaaatgtacttgcacgtttggggagtggctttgatatt
gtctctggcggcgagcttgctagagtgatcgaagccggtggtgatcccgctaaagtggta
ttttctggcgtaggtaaaactgtagctgaaatggagctggcgttagagataggtatttac
tgctttaatgttgagtctgcggctgagttggaacaattaagtgttgttgcacagcggatg
aataaagtggctccagtgtcgttgcgcatcaatccagatgttgatgctggcactcaccct
tacatctctacaggccttaaagagaataaatttggtattgcgatggaagaagctgaagct
attttcctgcgtgctaaagagttaccttgcatcgaaatcaaaggcgtagattgtcatatt
ggttctcagcttactgagataaaaccgtttttagatgcaatggacagaatgctagcttta
atcgatcgattagctgagcttggtattgaaattaagcattttgatgttggtggtgggcta
ggtgtaacttatgatgatgagttaccaccgcaacctgacgtatatgctgccgcgctattg
gagcgcttaggtggtcgagatcttaagctgatttttgaaccaggcagagcgattgccgcc
aatgcaggtatctttgtcacgcaagtactataccttaaagaaaatagcgataagcgtttt
gctttagttgatggtgcgatgaatgacttgattagaccttcgctttacagcgcatggcaa
aaaattatccccgcgatcgatcgtggtggtgaaaccttgaactatgatgttgtcggcccc
gtttgtgaaaccggtgactttttaggtaaggatcgccaactaaacatagctgcaggtgac
tacttggctattcgctcatcgggcgcctatggttttactatggcttcgaattacaattcg
cgtccacgagcagcggaattgatggttgatggcgacaatgcttacgtgatcagagaaaga
gaaaaacttgcacagctgtggcaaggtgagcagttactgccgtaa
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