Shewanella piezotolerans: swp_0780
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Entry
swp_0780 CDS
T00791
Name
(GenBank) Exonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
swp
Shewanella piezotolerans
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
swp03019
]
swp_0780
03009 Ribosome biogenesis [BR:
swp03009
]
swp_0780
Messenger RNA biogenesis [BR:
swp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
swp_0780
Ribosome biogenesis [BR:
swp03009
]
Eukaryotic type
Pre-60S particles
RNases
swp_0780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ACJ27593
UniProt:
B8CIW7
LinkDB
All DBs
Position
781023..781568
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AA seq
181 aa
AA seq
DB search
MAIDENNLIWVDLEMTGLEPAVDRIIEIATIVTDKELNIIAQGPVIAIHQTDEQLALMDD
WNQKHHGESGLVERVKASQFSEEDAIAQTIEFLSQYVPAGASPMCGNSIGQDRRFLNRYM
PALEDFFHYRNIDVSTVKELVRRWEPSAMEGFTKQNTHQALLDIQESIAELQFYRAKVFK
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggctatagatgaaaacaaccttatttgggtcgatcttgagatgacaggactagagcct
gctgttgataggattattgaaattgcgactatagtaaccgataaagagttaaatattatc
gcgcaaggtcctgttattgcgattcatcaaacagatgaacaactcgcattaatggacgat
tggaaccaaaagcatcatggtgaatctggactggttgagcgagtaaaagccagccaattt
agcgaagaggacgcgattgcacagacgattgagtttttatcgcaatatgttccagcgggt
gcttcacctatgtgtggtaacagcattggccaagatcgccgttttttaaatcggtatatg
ccagcacttgaagacttttttcactaccgaaatatcgatgtcagtacagttaaagaactt
gtacgccgctgggagccttcagcaatggaaggctttaccaaacaaaatactcaccaagcg
ttactcgatatccaagagtctatcgctgaattgcagttttatcgtgcaaaagtatttaaa
atttga
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