Staphylococcus xylosus SMQ-121: SXYLSMQ121_0002
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Entry
SXYLSMQ121_0002 CDS
T03311
Name
(GenBank) DNA polymerase III beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
sxl
Staphylococcus xylosus SMQ-121
Pathway
sxl03030
DNA replication
sxl03430
Mismatch repair
sxl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sxl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SXYLSMQ121_0002
03430 Mismatch repair
SXYLSMQ121_0002
03440 Homologous recombination
SXYLSMQ121_0002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sxl03032
]
SXYLSMQ121_0002
03400 DNA repair and recombination proteins [BR:
sxl03400
]
SXYLSMQ121_0002
Enzymes [BR:
sxl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SXYLSMQ121_0002
DNA replication proteins [BR:
sxl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SXYLSMQ121_0002
DNA repair and recombination proteins [BR:
sxl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SXYLSMQ121_0002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
DUF4346
Motif
Other DBs
NCBI-ProteinID:
AID41435
LinkDB
All DBs
Position
2114..3244
Genome browser
AA seq
376 aa
AA seq
DB search
MEFTIRRDYFINQLNDTLKAISPRTTLPILTGIKIEVKNNEVILTGSDSEISIEITIPKQ
VDGETIIEIAETGSVVLPGRFFVDIIKKLPGKEVKLSTNEQFQTLITSGHSEFNLSGLNP
DQYPLLPQVSRDDAIQLSVKVLKNVIAQTNFAVSTSETRPVLTGVNWLIQDNELICTATD
SHRLAVRKVALEDDSENKNVIIPGKALSELNKIMSDNEDDIDIFFASNQVLFKVGNVNFI
SRLLEGHYPDTSRLFPENYEIKLGIDNGEFYHAIDRASLLAREGGNNVIKLSTGNELVEL
SSTSPEIGTVNEEVKASNVDGGNLKISFNSKYMMDALKAIDNDEVEIEFFGTMKPFILKP
KDDDSVTQLILPIRTY
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggaatttacaattagaagagattattttattaatcaattaaatgacacactaaaagcc
atctcaccaagaacaacattaccaatcttaactggtataaaaattgaagttaaaaataac
gaagtaatacttactggatctgattcagaaatatcaatagaaatcactattcctaaacaa
gttgatggtgaaactattattgaaattgcagaaactggctcagtggtacttcctggtcgt
ttctttgtagatattattaaaaaattaccaggtaaagaagttaaattatctaccaacgaa
caattccaaacactaataacatctggtcattctgaatttaacttaagtggtttaaatcct
gatcaatatcctttattaccacaagtttctcgtgatgatgcaattcaattatcagttaaa
gtacttaaaaacgtgatagcacaaacaaatttcgcagtgtccacctcagaaacacgccca
gtactaacaggtgttaactggcttatacaagataatgaattaatatgcacagctacagat
tcacaccgcttggctgtaaggaaagtagctttagaagacgattctgaaaataaaaatgtc
atcattccaggtaaggcattatctgaattaaataaaattatgtctgataacgaagatgat
atcgacattttctttgcatctaatcaagtacttttcaaagtgggtaacgtaaactttatc
tcacgtttattagaaggtcattatcctgatacatctcgtttattcccggaaaattacgaa
attaaattagggattgataacggtgaattctatcacgcaattgatcgtgcatcattatta
gcacgtgaaggcggaaataatgtaataaaattaagcacaggtaatgaattagtagaatta
tcttcaacatctccagaaattggtacggtgaatgaagaagttaaagcaagtaatgtagat
ggtggtaacttaaaaatttctttcaactcaaaatatatgatggatgcacttaaagccatt
gataacgatgaagtggaaatcgaatttttcggaactatgaaaccatttattttaaaacca
aaagatgatgactcagttacacaacttattttaccaattagaacatattaa
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