Staphylococcus xylosus SMQ-121: SXYLSMQ121_1234
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Entry
SXYLSMQ121_1234 CDS
T03311
Name
(GenBank) ATP-dependent RNA helicase YqfR
KO
K18692
ATP-dependent RNA helicase CshB [EC:
3.6.4.13
]
Organism
sxl
Staphylococcus xylosus SMQ-121
Brite
KEGG Orthology (KO) [BR:
sxl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sxl03019
]
SXYLSMQ121_1234
03009 Ribosome biogenesis [BR:
sxl03009
]
SXYLSMQ121_1234
Messenger RNA biogenesis [BR:
sxl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SXYLSMQ121_1234
Ribosome biogenesis [BR:
sxl03009
]
Prokaryotic type
rRNA helicases
SXYLSMQ121_1234
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AID42665
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All DBs
Position
1351322..1352662
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AA seq
446 aa
AA seq
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MANHPFEKFNLEPSLIDAVKDLNFDQPTEIQSRVIPKIIKQVNLIGQSQTGTGKSHAFLL
PLINSIDTEYKEPQAIVVAPTRELAQQLFDVASHITKFKENVSVKLFIGGTDIEKDRSRA
KNQPQLVIGTPTRINDLAKHGDLHVHLASYLVIDEADLMIDLGLMDEVDYVATRLDEKAH
IAVFSATIPKSLHPFLNKYLENPDFVEIENTEKNKKNIEFYLIPTKGEAKIEKTLKLMDI
LNPYLCIIFCNSRDSADELAKQLNAAGLKVGMIHGGLSPRERKQQMKRIRNLEFQYVIAS
DLASRGIDIDGVSHVINFDVPNDIDFFTHRVGRTGRGQYKGVAITLYSPDEENNVALIEQ
RGYHFENVDIKDDELKAIKAHNLRQSRKNKDDHLTNQLKYKVKSNKKKVKPGYKKKFKRD
LDDLKRKERKQFSKQQSRQERKNRKG
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcacccatttgagaaatttaatttagaaccaagtctgattgatgctgtgaaa
gatttgaattttgatcaaccgactgaaattcaaagccgagtaataccaaaaataataaaa
caagtaaacttaatcggccaatcacaaacagggacaggtaaatcccacgcatttttatta
ccgttaatcaattcaatagatacagagtataaagaaccacaagcaattgttgtagctcct
acaagagaattagcacaacaactttttgatgttgctagccatataacaaaatttaaagaa
aacgtgtcagtcaaattattcataggtggcacagatattgaaaaagatcgtagtcgtgca
aagaatcaaccacaacttgtcataggtacacctacacgtattaatgatttagctaaacac
ggtgatttacatgtacacttagcatcctatttagtcattgatgaagcagacttaatgata
gatttaggactaatggatgaagtagattacgttgctacaagattagatgagaaagcgcat
attgcagtgttcagtgctacgataccaaaatcgttacatccatttttaaataaatatctt
gaaaatcctgattttgtagaaattgaaaatacagaaaagaacaaaaagaatattgaattc
tatttaattccaacaaaaggcgaagctaaaatagaaaagaccttaaaattaatggatata
ctaaacccttatttatgtatcattttctgtaatagcagagacagtgccgatgaattagct
aaacaactcaatgctgctggtttgaaagtaggcatgattcatggtggtctttcacctaga
gaacgtaagcaacaaatgaaacgtattagaaatttagaatttcaatacgtaatagctagt
gatttagcatcacgtggtatcgatatcgatggtgtaagtcatgtgattaactttgatgtg
ccaaatgatattgatttctttacacaccgcgtaggacgtactggtagaggacaatataaa
ggcgttgcaataactttatatagccctgatgaagaaaataatgttgcattaattgaacaa
cgtggctatcattttgaaaacgtagatattaaagacgatgagttaaaggccattaaagct
cataatttacgtcaatcacgtaaaaataaagatgatcatttaacaaatcaattaaaatat
aaagttaaaagcaataagaaaaaagtcaaacctggttataagaaaaaattcaaacgtgat
ttggatgatttaaaacgtaaagagcgtaaacaattcagcaaacaacagagtagacaggaa
agaaaaaatagaaaaggatag
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