Staphylococcus xylosus C2a: SXYL_01620
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Entry
SXYL_01620 CDS
T03742
Symbol
polC
Name
(GenBank) DNA polymerase III polC-type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
sxo
Staphylococcus xylosus C2a
Pathway
sxo03030
DNA replication
sxo03430
Mismatch repair
sxo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sxo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SXYL_01620 (polC)
03430 Mismatch repair
SXYL_01620 (polC)
03440 Homologous recombination
SXYL_01620 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sxo03032
]
SXYL_01620 (polC)
03400 DNA repair and recombination proteins [BR:
sxo03400
]
SXYL_01620 (polC)
Enzymes [BR:
sxo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SXYL_01620 (polC)
DNA replication proteins [BR:
sxo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SXYL_01620 (polC)
DNA repair and recombination proteins [BR:
sxo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SXYL_01620 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
HHH_3
tRNA_anti-codon
RNase_H_2
T2SSK
DUF6448
Motif
Other DBs
NCBI-ProteinID:
CEF19004
UniProt:
A0A5R9B6A9
LinkDB
All DBs
Position
Chr1:complement(1669293..1673609)
Genome browser
AA seq
1438 aa
AA seq
DB search
MSMTNEEKFKILADQIKIAEHLDSEILTKSELTRVDVKAVDRSWVFQITFPYFLTIEDYL
LFTSAITEEFKTIAEVKCNITIKDKANQDEYAIKYFSHCIDQTKLSPKVKGQLKQKRLIM
SGDILKVMCQNDVERDHFDKACNGSLIAAYQQCGFSISKVVFETDSAVNDGDLASLEAHI
QEEDEKSAREATEKLEKMKAEKAKQQDNNESSVSKCQIGKPIQIENVRTIDSIIEEEFKA
AVEGVIFDINLKELKSGRHIVEIKVTDYTDSLVLKMFTRKNKDDLAHFKALSVGKWVRAQ
GRIEEDTFVRDLVMMMSDIEEIKKATKQDKSEEKRVEFHLHTSMSQMDGIPNISTYVDQA
AKWGHKAIAVTDHNVVQAFPDAHAAAEKNGIKMIYGMEGMLVDDGVPIAYKPKDCNLKTA
TYVVFDVETTGLSNQYDKIIELAAVKVKDGEIIDKFERFSNPHERLSETIKNLTHISDDM
LVDAPEIEEVLTEFKSWVGDAIFVAHNASFDMGFIDTGYEHVGIGASTNGVIDTLELSRT
INTEYGKHGLNFLAKKYGVELTQHHRAIYDTEATAYMFIKMLKQLEELGVHNHQDINTSL
TNEDAYKRARPNHVTLIVQNQEGLKNLFKIVSASLVQYYYRTPRIPRSLLDEYREGILVG
SACDEGEVFTAVMQKDQSQVERIAKYYDFIEVQPPALYQDLIDRELVRDNETLHEIYNRL
IRAGDVNNIPVIATGNAHYLNEHDAIARKILIASQPGNPLNRSTLPEAHFRTTDEMLDEL
HFLGEEKAYELVIKNTNELADSIERVVPIKDELYTPRMEGANDEIREMSYNNAKALYGED
LPQIVIDRLEKELESIIGNGFSVIYLISQRLVKKSLNDGYLVGSRGSVGSSFVATMTEIT
EVNPLPPHYICPECKNSEFFNDGSVGSGFDLPDKKCESCGCDLIKEGQDIPFETFLGFKG
DKVPDIDLNFSGEYQPKAHNYTKELFGEDKVFRAGTIGTVAEKTAFGFVKGYLNDQGIHK
RGAEIDRLVKGCTGVKRTTGQHPGGIIVVPDYMDIYDFTPVQFPADDQASSWMTTHFDFH
SIHDNVLKLDILGHDDPTMIRMLQDLSGIDPKTIPVDDKDTMGIFSSPEPLGVTSEEILC
KTGTFGVPEFGTGFVRQMLEDTKPTTFSELVRISGLSHGTDVWLGNAQDLIRSGKCDLAS
VICCRDDIMVYLMYNGLEPSLAFKTMEFVRKGKGLTDDMVEAMVDNEVPDWYLDSCRKIK
YMFPKAHAAAYVLMAVRIAYFKVHYPLYYYASYFTVRASDFDLISMIKDKESIRNTVNDM
YSRYMDLAKKEKDTLTVLEIMNEMAQRGYRMQPISLEKSKAFEFIIEGDTLIPPFISVPG
LGENVAQRIVEAREEGPFLSKEDLNKKAGLSQKVIEYLDELGSLPNLPDKAQLSIFDM
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgacaaacgaggaaaagtttaaaatcctagctgaccaaattaaaatcgcagag
catttggattctgaaatattaacaaaaagtgaattaacacgcgtagatgttaaagcagtg
gatcgttcatgggtatttcaaatcacgttcccatattttttaacaatagaagattactta
cttttcacaagtgcaattactgaagaattcaaaacaattgctgaggtaaagtgcaatatt
acaataaaagataaagctaatcaagatgaatatgcgattaaatactttagccattgtatc
gatcaaacaaagttatcaccaaaagttaaaggccaattaaagcagaagcgtttgattatg
tctggagatattttaaaagtgatgtgccaaaacgatgttgaacgcgatcattttgataaa
gcttgtaacggtagtttaattgcagcatatcaacagtgtggatttagtataagtaaagtt
gtttttgaaactgatagtgcggtaaacgatggtgatttagcatcattagaggcacacata
caagaagaagatgaaaagagtgcacgtgaagcaacagaaaaattagaaaaaatgaaagct
gaaaaagcgaaacaacaagataataacgaaagttctgtctcaaaatgtcaaattggtaaa
ccaattcaaattgagaacgtacgtacaattgattctattattgaagaagagtttaaagca
gctgttgaaggtgttatttttgatattaatctaaaagagttgaaaagtggccgacatatt
gtagaaatcaaggtgacagactatactgattcactcgtattaaaaatgttcacgcgtaaa
aataaagatgacttagctcattttaaagctttaagcgtaggaaaatgggtgcgtgcacaa
ggtagaatagaagaagatactttcgtacgagatttagttatgatgatgtcagatatagaa
gaaattaaaaaagcaacaaaacaagataaatctgaagaaaaaagagtcgaattccatttg
cacacttcaatgagccaaatggacggtatcccaaatatttctacatatgtagaccaagct
gctaagtggggacataaagctattgctgttacggatcataacgttgtccaagcatttcca
gatgcacacgctgcggcagaaaaaaacggcattaaaatgatttatggtatggaaggtatg
cttgtagatgacggagtgccaatagcgtataaacctaaggattgcaatttaaaaacagca
acttatgttgtgtttgacgttgagacgacaggattatctaaccaatacgacaagattatt
gagcttgccgctgtcaaagttaaagatggcgaaatcatagataaatttgaacgctttagt
aacccgcatgaacgtttatcagaaacgattaaaaatttaactcatatttctgatgatatg
ttagtagatgcaccagaaattgaagaagtgttaacagaatttaaatcatgggtcggagat
gcaatctttgttgctcataacgcttcctttgatatgggcttcatcgacaccggttatgaa
catgtggggataggtgcttctacaaacggtgttattgatacattagaattatccagaaca
attaatactgaatatggtaagcatggtttgaatttcttagctaaaaaatacggtgtggaa
ttgactcaacaccatagagctatttatgatactgaagcaacagcgtatatgtttataaaa
atgttgaaacaattagaagagctgggtgttcataatcatcaagatatcaatacttcttta
acaaatgaggatgcatacaaacgtgcgagacctaaccatgttacactcattgtccaaaac
caagaaggattgaagaatctctttaaaattgtaagtgcttcgttagttcaatactactat
cgtacaccgagaattccacgttcactgctagatgaatatcgtgaagggatattagtaggc
tcagcttgtgacgaaggtgaagtatttacagcagtaatgcaaaaagatcaatcccaagtg
gaacgaatcgctaaatattacgattttattgaagttcaaccaccagcgctctatcaagat
ttaatcgatagagaacttgtgagagataatgaaacattacatgaaatatataatcgttta
ataagagcgggtgatgttaataatattcctgtaattgcaacaggcaacgctcactattta
aatgagcacgacgcaattgcacgaaaaattttaattgcttcacaaccaggtaatccatta
aatcgttccactttaccagaagcacattttagaacaactgatgaaatgttagatgaatta
cattttctaggcgaagaaaaagcatatgaacttgttattaaaaatacaaatgaattagca
gattcaattgaacgtgtagtaccaattaaagacgaattgtatacgccaagaatggaaggc
gcaaacgatgaaattcgtgaaatgagttataataatgccaaagcgttatatggggaagac
ttgccgcaaattgttattgatcgtttagagaaagaattagaaagtattatcggaaacgga
ttctctgttatttatttaatttcacagaggcttgtaaaaaaatcattgaatgatggctat
ttagtaggttcacgtggttcggtagggtctagctttgtagcaacaatgacagaaattaca
gaagtaaatccgttgccaccgcattatatttgccctgaatgtaaaaatagtgaattcttt
aatgatggttcagttggttctggtttcgacttacctgataaaaagtgtgagtcttgtggc
tgtgacttaattaaagaagggcaagacattccctttgaaacgttcttaggatttaaagga
gacaaagtaccagatattgatttgaactttagtggggaataccagccaaaagcacataat
tatacaaaagaactcttcggagaagataaagtgtttcgtgccggaacgatcggtacagtt
gccgaaaaaactgcatttggttttgttaaaggttacttaaatgatcaaggtatccataaa
agaggtgctgagattgatagactagtaaaaggttgtacaggagtaaaacgtacaacagga
caacatccaggtggtatcatagttgtaccagattatatggatatatatgattttacacca
gttcaattccctgcagatgatcaagcttcatcttggatgacgacgcattttgatttccac
tcaattcatgataatgtattgaaattagatattctgggacacgatgaccctactatgata
cgtatgttacaagatttatctggtattgatccgaaaacaattccagttgatgataaagat
acaatgggtatatttagttcaccagaaccattgggtgtaacttcagaagaaattctatgt
aaaactggcacatttggtgtacctgaatttggtactggatttgttagacaaatgctagaa
gataccaagcctaccacattctcagaacttgttagaatttctggtctttctcatggtacg
gatgtgtggttaggtaatgctcaagatttaattcgttctggaaaatgtgatctagctagc
gtaatttgttgtcgtgatgacattatggtttacttaatgtataacggtttagaaccatca
cttgccttcaaaactatggaatttgtgcgtaaaggtaaagggttaacagacgatatggtt
gaagcgatggttgataatgaagtgccagattggtatttagattcatgtagaaaaattaaa
tacatgttccctaaagcgcatgctgccgcttatgtattgatggcggtacgtattgcttat
ttcaaagttcattatccattgtattattatgcaagttacttcacagtacgtgcttctgat
tttgacttaatatcaatgattaaagacaaagaaagcattcgtaatacagtaaatgacatg
tattcaagatatatggatttggctaaaaaggaaaaagatacattaactgtgttggaaatt
atgaatgaaatggctcaacgaggttaccgtatgcaaccgattagtttagaaaagagtaaa
gcttttgaatttattattgaaggtgatactttaatcccaccatttatatcagttccaggt
ctcggagaaaatgttgcacaaagaatagttgaagcacgtgaagaagggccattcttgtct
aaagaagatttaaataagaaagctggtttatcacaaaaagtaatcgagtatttagatgaa
ttaggttcattacctaacttaccagataaagctcaactttctatttttgacatgtaa
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