Sphingobium yanoikuyae: A6768_08650
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Entry
A6768_08650 CDS
T05170
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
sya
Sphingobium yanoikuyae
Brite
KEGG Orthology (KO) [BR:
sya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sya03400
]
A6768_08650 (addA)
Enzymes [BR:
sya01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A6768_08650 (addA)
DNA repair and recombination proteins [BR:
sya03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
A6768_08650 (addA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
PDDEXK_1
AAA_30
SLFN-g3_helicase
DEAD
Motif
Other DBs
NCBI-ProteinID:
ATI80067
UniProt:
A0A291MY86
LinkDB
All DBs
Position
complement(1865612..1869022)
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AA seq
1136 aa
AA seq
DB search
MGATMAKGSSPLQPLAGAQALAAAPDAHVWLSASAGTGKTHVLTARVFRLLLQGVRPENI
LCLTFTKAGAAEMADRIHDRLATWVQMEGTVLAKDLMALGEDHGPDMQDKARRLFAEVLE
STGGGLRIQTIHGFCQQLLASFPLEADLAPGFRPLDAREQSVLARQTLADMVIRAEELGD
GDLIDALQALSLRLGEGAAEAFLLRCAARLPALTELPGDIGPWLARELRLPDGDIDAWLA
DQCSDAMFDMRSLAWVAQANADWGTGRALERCDRIAAWRGRDPAARAATLTDLHSAWAKA
DGDLISAKGWVPPIDGYGEATARLHARCAELIGVKLQADYAALLARALHAGRAYARAYDE
AKRLAGAVDFDDLIERASGLLQQDGIAEWIRYKLDQRIDHILVDEAQDTNIRQWRIVQAL
TEEFFTDEWEPEAKVRTLFTVGDFKQAIFGFQGTSPKAFSDAQLVFGHYAKQAKQSFHDL
SLDRSFRSTPPVLDLVDRTIATLRAQSLGLSDGEVRHISANRHPGDVLLWKPTIAGLADE
VEGEEDWVADQERELAGKIARQIRQWIDEKMMLEARGRPVRPGDIMILVRRRSELARLIV
ARLYEEKVAVAGIDRLRLNAPLAVRDLLAALRFATQPDDDLNLAALLVSPLIGWTQDELM
QRAIGRKGGLWRHLLQRLDDAQLLPLRQLLGQADFTTPYRYLEAILSGPMDGRRRLIERL
GAEAADPIEELLNAALGFEADDHPSLQRFIDWFDRGEVEIVRDAAAQGDALRLLTVHGAK
GLQAPIVILADACLDPDAGNRMDSLEWNGLPILTPRKGERLGPIGDVAADAAAIEREEHW
RLLYVALTRAEEKLIVAGSLGPRAKGEVKPQSWYGAVDAAMVDMGCDWEADPLWGARRRW
RGTEVLTPKAAQPESAEDKPVVVEPEWLRAQAPAEQRPPRPLAPSAPVEDDVPNPPPTAA
MRQAAERGRWLHALFQRLPDLPAERRREGAERWLEQQGAGDVTLRRDVIDHALRVIEDPH
FAALFAPGALAEAPIAAVVGEAVIAGTVDRLRVEADRVQLVDFKTGRMTPRDAEEVPVAH
VRQMAAYVAALEVIFPGRAVEAALLYTSAARLIALPAAQLAPYKPGFSPTQQYLLL
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcgacgatggctaaaggctccagtccgctgcaaccgttggccggtgcgcaggcg
ctggccgctgcgcccgatgctcatgtctggctgtcggcctccgccggcaccggcaagacc
catgtgctgaccgctcgcgtcttccgcttgctgctgcagggcgtgcgtcccgaaaatatc
ctctgcctgacctttaccaaggccggcgcggcggaaatggccgaccgcatccatgatcgg
ctcgcgacttgggtgcagatggaaggcacggtcctggccaaggatcttatggccttgggg
gaagaccacgggcccgacatgcaggacaaggctcgccgcctgttcgccgaagtgctggaa
tcgaccggtggcggtctgcgcatccagacgatccatggcttttgccagcaattgctggcc
tccttcccgctggaggccgacctcgcccccggcttccgcccgctcgacgcgcgcgaacag
agtgtgctggcccgccagacattggccgacatggtcatccgcgccgaggaactgggcgat
ggcgacctgatcgacgccttgcaggcgctgagcctgcgactgggcgagggtgcggccgag
gctttcctgctccgctgtgccgcccgcctgccggcgctgacggagctacccggcgatatc
ggcccttggctggcgcgcgaactgcgcctgcccgacggggatatcgacgcctggctggcg
gaccagtgcagcgacgccatgttcgacatgcgcagtttggcctgggtggcgcaggccaat
gccgactggggcaccggccgggcactggaacgctgcgaccggatcgccgcctggcgcggg
cgagatcccgcagcccgcgccgcgaccctgaccgacctgcatagcgcctgggccaaggcg
gatggcgacctgatttctgccaagggctgggtgccgccgatcgacggctatggcgaggca
acggcgcggcttcatgcccgctgcgccgaactgatcggggtcaagctgcaggcggactat
gccgccctgctggcccgcgcgctccatgccggccgtgcctatgcccgcgcctatgatgaa
gccaaacggctcgccggcgcagtcgatttcgacgacctgattgaacgggcgtctgggctg
ctgcaacaggacgggattgctgaatggatccgctacaagctggatcaacggatcgaccat
atccttgtcgatgaagcgcaggacacgaacatccggcaatggcggatcgtgcaggccttg
accgaagagtttttcaccgatgagtgggaaccggaggcaaaggttcggacgctattcact
gtcggcgacttcaagcaggctatcttcggatttcagggcaccagtcccaaggcgttctcc
gatgcgcagttggtgtttggtcattatgccaagcaagccaagcaatctttccacgacctg
tcgctcgatcgcagcttccggtcgacaccgcccgtactcgatctggtcgaccggacgatc
gccaccttgcgggcgcaatcgctgggcctgtccgacggcgaggtgcgccatatcagcgcc
aatcgccatccgggcgacgtgctgctgtggaagccgacgatcgccggcctggcagacgag
gtcgagggcgaggaggattgggtcgccgatcaggaacgggaactggccggcaagatcgcg
cgccagatccggcaatggatcgacgagaagatgatgctggaggcgcgggggcgcccggtc
cgccccggcgacattatgatcctggtccgccgccgcagcgaactggcgcgactgatcgtt
gcgcggctttatgaggaaaaggtcgcggtcgccgggatcgaccggctgcgcctcaatgcg
ccgctggcggtccgtgatctgctggccgcgctgcgctttgctacgcagcccgatgatgac
ctgaaccttgccgccctgctggtgtcgccgctgatcggctggacccaggacgaactgatg
cagcgggcgatcgggcgcaagggtggcctgtggcgtcatctgctccagcggctggatgat
gcgcaattgctgccgctgcgccaattgctggggcaggcggatttcaccaccccctatcgc
tatctggaggcgatcctgtccggcccgatggacgggcgccgccggctgatcgagcggctc
ggcgcggaagcggcagacccgatcgaggaattgctgaatgccgcgctcggcttcgaggcg
gacgaccatccctcgctgcagcgtttcatcgactggtttgaccggggcgaggtagagatt
gtccgcgacgcggcggcgcagggcgatgcgctgcggttgctgaccgtgcatggcgccaag
gggctgcaggcgccgatcgtcattctcgccgatgcctgtcttgatcccgacgccggcaac
cgcatggattcgctcgaatggaatggcctgccgatcctgaccccgcgcaagggcgagcga
ctaggaccgatcggcgacgtcgcggccgatgccgcggcaatcgagcgggaggagcattgg
cgccttctctatgtcgccctgacccgcgccgaggagaaactgatcgtcgccggatcgctc
gggccaagggcgaagggtgaggtcaagccgcaaagctggtatggcgcggtcgatgcggcg
atggtcgacatgggctgcgactgggaagccgatccgctctggggcgcccgccgccgctgg
cgcgggaccgaggtgctgacgcccaaggccgcgcagcccgaaagcgccgaagacaagccc
gtggtggtcgagccggagtggctgcgcgcgcaggcgccggcggaacagcgtccgccccgg
ccgctggcgccgtccgcgccggtcgaggatgatgtccccaacccgccgccgacggctgcg
atgcgccaggcggccgaacgcggtcgctggcttcatgccctgttccagcgactgcccgat
ctgccggcggagcgacggcgcgagggcgccgaacgctggctggagcagcagggggcaggg
gatgtcactctgcgccgggacgtgattgaccatgcgctgcgcgtgatcgaggatccgcat
ttcgccgccctgttcgcgccgggtgcgctggccgaagcgccgatcgctgcggtggtgggc
gaagcggtgattgccggcacggttgaccggctgcgggtcgaggcggaccgggtccaactg
gtcgatttcaagaccggccggatgacgccgcgcgatgcggaggaggtgccggtcgcccat
gtccggcaaatggccgcctatgtcgccgcgctggaagtgatcttccccggccgcgcggtg
gaagcggccctgctctataccagcgcggcgcggctcatcgcgctgccggcggcgcaactg
gcgccctacaagccgggcttttcgcccacgcagcaatatttgctgctgtga
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