Sphingobium yanoikuyae: A6768_09685
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Entry
A6768_09685 CDS
T05170
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
sya
Sphingobium yanoikuyae
Pathway
sya03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A6768_09685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sya03400
]
A6768_09685
DNA repair and recombination proteins [BR:
sya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A6768_09685
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
HHH_5
GIY-YIG
HHH_2
UVR
HHH
DUF5588
DprA_N
Motif
Other DBs
NCBI-ProteinID:
ATI83243
UniProt:
A0A291N789
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Position
complement(2095042..2096955)
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AA seq
637 aa
AA seq
DB search
MSQPQSPDRFNEDKATYTVTGSQPDIDAGVEAIRTTLKTLPTRPGVYRMQDARGDVLYVG
KARALKNRVANYTQVDRLPNRLRRMVAQTRSMTIVTTNSEAEALLLEAQLIKRYRPPYNV
LLRDDKSFPFILLREDHDFPRVQKHRGARKYKGRYYGPFASAGSVTRTINALQKLFLLRS
CTDSFFANRSRPCLLYQIKRCSAPCVDRIDTAGYAELVQDAQDFLGGKSTAVQQKLGAAM
EAAAEALDFEQAAMIRDRLKALTFIQGSQAINAEGLGDADIFALAEKGGSMCIQAFFIRG
GQNWGHRSFFPVHTNDVATEEVLESFMAQFYEEVPPPKLILTDREPAECELMALALSERL
GSKVRIEVPQRGERTRLIKQAQRNAVEALDRRLAETTTQAKILDEMVEAFGLDGVPDRIE
IYDNSHIQGAHALGAMVVAGPEGFRKNAYRKFNMKNPEISNDDFAMMREMFERRFGRAAR
EDPDRDGGEWPDLVLIDGGKGQLSAARAMLEDMGIEDVCMIGIAKGPHHGRDGREVFHLM
DGREVSFPINHPLLFYMQRLRDEAHRFAIGAHRAKRSKAITVSSLDEVPGIGPARKKALL
MHFGTARAVRDAALEDLQRAPGVSKAVAQQVYDYFHG
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagccgcaatcccccgatcgtttcaacgaagacaaggcgacctataccgtcacc
ggcagccagcccgatatcgatgcgggcgtggaggcgatccgcacgacgctgaagaccttg
ccgacccggcccggcgtctatcggatgcaggatgcccgcggcgatgtcctctatgtcggc
aaggcgcgggcgctgaagaaccgggtcgccaattatacccaggtcgaccggctgcccaac
cggctgcggcgcatggtggcgcagacgcgcagcatgacgatcgtcaccaccaacagcgag
gcggaagcgctgctgctggaggcgcaactcatcaagcgctatcgcccgccctataatgtc
ctgctgcgcgacgacaaaagcttccccttcatcctgttgcgcgaggatcatgattttccc
cgcgtgcagaagcatcgcggcgcgcggaaatataaggggcgctattatggccccttcgcc
agcgccggatcggtgacgcggacgatcaatgcgctgcagaagctgttcctgctgcggtcc
tgcaccgacagcttcttcgccaatcgttcgcggccctgcctgttgtatcagatcaagcgc
tgctcggcgccctgcgtcgatcgcatcgacacggccggctatgccgaactggtgcaggac
gcgcaggatttccttggcggcaagtcgaccgccgtgcagcagaagctgggcgcggcgatg
gaggcagcggccgaggcgctggatttcgaacaggcggcgatgatccgcgaccggctgaag
gcgctgaccttcatccagggatcgcaggcgatcaatgccgaggggctgggcgatgccgac
atcttcgcgctggcggagaagggcggatcgatgtgcatccaggccttcttcatccgcggc
ggccagaattgggggcatcgcagcttcttcccggtccacaccaatgatgtggcgaccgaa
gaggtgctggaaagcttcatggcgcaattttacgaggaagtgccgccgcccaagctgatc
ttgaccgaccgtgagccagccgagtgcgagctgatggcgctggcgctgagcgaaaggctg
ggcagcaaggtaaggatcgaggtgcctcagcgcggcgagcggacgcggcttatcaagcag
gcgcagcgcaacgcggtggaggcgctggatcgtcgcctagccgagaccacgacccaggcc
aagatattggacgagatggtcgaagccttcgggctggacggcgtgcccgaccggatcgaa
atctacgacaacagccacatccagggcgcccatgcgctgggggcgatggtggtcgccggg
ccggagggcttccgcaagaacgcctatcgcaagttcaacatgaagaaccccgaaatctcg
aacgacgatttcgcgatgatgcgcgagatgttcgagcggcgcttcggccgggccgcgcgt
gaagaccccgatcgcgacggcggcgaatggccggacctagtgctgatcgacggcggcaag
gggcaattgtcggcggcgcgggcgatgctggaggatatgggcatcgaggatgtctgcatg
atcggcatcgccaaggggccacatcatggccgcgacgggcgcgaggttttccatctgatg
gatggtcgcgaagtcagtttcccgatcaatcatccgttgctcttctacatgcagcgcctg
cgcgatgaagcgcatcgctttgccatcggcgcgcatcgggcgaagcgcagcaaggcgatc
accgtgtcgtcgctggacgaggtgcccggcatcggcccggcccggaaaaaggcgcttctg
atgcattttggcacggcgcgggcggtgcgcgatgcggcactggaggatctgcaacgcgcc
cccggcgtgtcgaaggcggtggcgcagcaggtctatgattatttccacggctga
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