KEGG   Sphingobium yanoikuyae: A6768_09685
Entry
A6768_09685       CDS       T05170                                 
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
sya  Sphingobium yanoikuyae
Pathway
sya03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sya00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    A6768_09685
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sya03400]
    A6768_09685
DNA repair and recombination proteins [BR:sya03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A6768_09685
SSDB
Motif
Pfam: UvrC_RNaseH_dom HHH_5 GIY-YIG HHH_2 UVR HHH DUF5588 DprA_N
Other DBs
NCBI-ProteinID: ATI83243
UniProt: A0A291N789
LinkDB
Position
complement(2095042..2096955)
AA seq 637 aa
MSQPQSPDRFNEDKATYTVTGSQPDIDAGVEAIRTTLKTLPTRPGVYRMQDARGDVLYVG
KARALKNRVANYTQVDRLPNRLRRMVAQTRSMTIVTTNSEAEALLLEAQLIKRYRPPYNV
LLRDDKSFPFILLREDHDFPRVQKHRGARKYKGRYYGPFASAGSVTRTINALQKLFLLRS
CTDSFFANRSRPCLLYQIKRCSAPCVDRIDTAGYAELVQDAQDFLGGKSTAVQQKLGAAM
EAAAEALDFEQAAMIRDRLKALTFIQGSQAINAEGLGDADIFALAEKGGSMCIQAFFIRG
GQNWGHRSFFPVHTNDVATEEVLESFMAQFYEEVPPPKLILTDREPAECELMALALSERL
GSKVRIEVPQRGERTRLIKQAQRNAVEALDRRLAETTTQAKILDEMVEAFGLDGVPDRIE
IYDNSHIQGAHALGAMVVAGPEGFRKNAYRKFNMKNPEISNDDFAMMREMFERRFGRAAR
EDPDRDGGEWPDLVLIDGGKGQLSAARAMLEDMGIEDVCMIGIAKGPHHGRDGREVFHLM
DGREVSFPINHPLLFYMQRLRDEAHRFAIGAHRAKRSKAITVSSLDEVPGIGPARKKALL
MHFGTARAVRDAALEDLQRAPGVSKAVAQQVYDYFHG
NT seq 1914 nt   +upstreamnt  +downstreamnt
atgtcgcagccgcaatcccccgatcgtttcaacgaagacaaggcgacctataccgtcacc
ggcagccagcccgatatcgatgcgggcgtggaggcgatccgcacgacgctgaagaccttg
ccgacccggcccggcgtctatcggatgcaggatgcccgcggcgatgtcctctatgtcggc
aaggcgcgggcgctgaagaaccgggtcgccaattatacccaggtcgaccggctgcccaac
cggctgcggcgcatggtggcgcagacgcgcagcatgacgatcgtcaccaccaacagcgag
gcggaagcgctgctgctggaggcgcaactcatcaagcgctatcgcccgccctataatgtc
ctgctgcgcgacgacaaaagcttccccttcatcctgttgcgcgaggatcatgattttccc
cgcgtgcagaagcatcgcggcgcgcggaaatataaggggcgctattatggccccttcgcc
agcgccggatcggtgacgcggacgatcaatgcgctgcagaagctgttcctgctgcggtcc
tgcaccgacagcttcttcgccaatcgttcgcggccctgcctgttgtatcagatcaagcgc
tgctcggcgccctgcgtcgatcgcatcgacacggccggctatgccgaactggtgcaggac
gcgcaggatttccttggcggcaagtcgaccgccgtgcagcagaagctgggcgcggcgatg
gaggcagcggccgaggcgctggatttcgaacaggcggcgatgatccgcgaccggctgaag
gcgctgaccttcatccagggatcgcaggcgatcaatgccgaggggctgggcgatgccgac
atcttcgcgctggcggagaagggcggatcgatgtgcatccaggccttcttcatccgcggc
ggccagaattgggggcatcgcagcttcttcccggtccacaccaatgatgtggcgaccgaa
gaggtgctggaaagcttcatggcgcaattttacgaggaagtgccgccgcccaagctgatc
ttgaccgaccgtgagccagccgagtgcgagctgatggcgctggcgctgagcgaaaggctg
ggcagcaaggtaaggatcgaggtgcctcagcgcggcgagcggacgcggcttatcaagcag
gcgcagcgcaacgcggtggaggcgctggatcgtcgcctagccgagaccacgacccaggcc
aagatattggacgagatggtcgaagccttcgggctggacggcgtgcccgaccggatcgaa
atctacgacaacagccacatccagggcgcccatgcgctgggggcgatggtggtcgccggg
ccggagggcttccgcaagaacgcctatcgcaagttcaacatgaagaaccccgaaatctcg
aacgacgatttcgcgatgatgcgcgagatgttcgagcggcgcttcggccgggccgcgcgt
gaagaccccgatcgcgacggcggcgaatggccggacctagtgctgatcgacggcggcaag
gggcaattgtcggcggcgcgggcgatgctggaggatatgggcatcgaggatgtctgcatg
atcggcatcgccaaggggccacatcatggccgcgacgggcgcgaggttttccatctgatg
gatggtcgcgaagtcagtttcccgatcaatcatccgttgctcttctacatgcagcgcctg
cgcgatgaagcgcatcgctttgccatcggcgcgcatcgggcgaagcgcagcaaggcgatc
accgtgtcgtcgctggacgaggtgcccggcatcggcccggcccggaaaaaggcgcttctg
atgcattttggcacggcgcgggcggtgcgcgatgcggcactggaggatctgcaacgcgcc
cccggcgtgtcgaaggcggtggcgcagcaggtctatgattatttccacggctga

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