KEGG   Sphingobium sp. YBL2: TZ53_00860
Entry
TZ53_00860        CDS       T03855                                 
Name
(GenBank) glycine dehydrogenase
  KO
K00282  glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
Organism
syb  Sphingobium sp. YBL2
Pathway
syb00260  Glycine, serine and threonine metabolism
syb00630  Glyoxylate and dicarboxylate metabolism
syb00785  Lipoic acid metabolism
syb01100  Metabolic pathways
syb01110  Biosynthesis of secondary metabolites
syb01200  Carbon metabolism
Module
syb_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:syb00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    TZ53_00860
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    TZ53_00860
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    TZ53_00860
Enzymes [BR:syb01000]
 1. Oxidoreductases
  1.4  Acting on the CH-NH2 group of donors
   1.4.4  With a disulfide as acceptor
    1.4.4.2  glycine dehydrogenase (aminomethyl-transferring)
     TZ53_00860
SSDB
Motif
Pfam: GDC-P Aminotran_5 Cys_Met_Meta_PP
Other DBs
NCBI-ProteinID: AJR22551
UniProt: A0A0C5XCV7
LinkDB
Position
complement(176750..178108)
AA seq 452 aa
MRYLPLTDTDRQDMLSVIGASSIDDLFVDVPAEARLSDKIAGLPDHASELAVERHMAALA
RKNLSAGEAPFFLGAGAYRHHVPASVDHLIQRGEFLTAYTPYQPEIAQGTLQVLFEFQTQ
VARLLGCDVANASMYDGSTACWEAIGMARRITRRGKAILSSGLHPHYVSVANTMAKFTGD
ALVHQAPTLDAATDTDALIAGIDKDTSCVVVQYPDILGRIADLTPLADAAHAAGALLVAV
VTEPVALGAIRAPGHMDADIVVGEGQSIGVGLQFGGPYLGLFACKQKYVRQMPGRLCGET
VDAAGKRGFVLTLSTREQHIRREKATSNICTNSGLCALAFSIHMTLLGERGLRELAALNH
GLAVQAADRLAQVPGVTLLNDSFFNEFTLILSKDAREVVRNLADKGVLGGVSLGRLFPDA
PAIGNGLVVAVTETVTVEDIEIFAKALEEELA
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgcgctacctaccccttaccgataccgaccggcaggacatgctgtccgtcatcggggcg
tcctccattgacgacctgttcgtggacgttcctgccgaggcccgcctttcggacaagatc
gccggcctgcccgaccatgccagcgaactggcggtcgagcgccacatggcggcccttgcg
cggaagaatctgtcggcgggggaagcgcccttcttcctgggtgcgggcgcgtacaggcat
catgtccccgccagcgtcgatcatctgatccagcgcggcgagttcctgacggcctacacc
ccctatcagccggaaatcgcgcagggcaccttgcaggtgctgttcgaattccagacgcag
gtggcgcgcctgctgggctgcgacgtcgccaacgcctccatgtatgacgggtcgaccgcc
tgctgggaagcgatcggcatggcccgccgcatcaccaggcgcggcaaggcgatcctgtcg
tccggcctgcacccccattatgtctcggtcgccaacaccatggcgaagttcaccggcgac
gcgctggtgcatcaggcgccgacgctggacgccgccaccgacaccgacgcgctgatcgcc
gggatcgacaaggatacaagctgcgtcgtcgtccaatatcccgacattctcggccgcatc
gccgacctgacgccgctcgccgatgccgcccacgcggcgggcgcgctgctggtcgcggtc
gtcaccgagccggtcgccctgggtgcgatcagggcgccgggccatatggatgcggacatc
gtcgtcggggaagggcagtccatcggcgtcggcctgcaatttggcgggccttatctgggc
ctgttcgcgtgcaagcagaaatatgtccgccagatgccgggccgcctttgcggcgagacg
gtggacgcggcgggcaagcgcggcttcgtgctgacgctttctacgcgcgagcagcatatc
cgccgtgaaaaggcgacgtcgaacatctgcaccaattccggcctctgcgcgctggcgttc
agcatccatatgacgctgctgggcgaaaggggattgcgggaactggcggcgctcaaccat
gggctggccgttcaggcggccgaccggctggcccaggtgcccggcgtcacgctgctcaac
gacagtttcttcaacgaattcaccctgatcctgtcgaaggacgcccgcgaagtcgtccgc
aacctggcggacaagggcgtgctgggcggcgtctcgctcggtcgcctgttcccggacgcg
ccggcaatcggcaacggactggtcgtcgccgtcaccgaaaccgtgacggtggaggatatc
gaaatcttcgcgaaggcgctggaggaggaactggcatga

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