Sphingobium sp. YBL2: TZ53_00860
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Entry
TZ53_00860 CDS
T03855
Name
(GenBank) glycine dehydrogenase
KO
K00282
glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:
1.4.4.2
]
Organism
syb
Sphingobium sp. YBL2
Pathway
syb00260
Glycine, serine and threonine metabolism
syb00630
Glyoxylate and dicarboxylate metabolism
syb00785
Lipoic acid metabolism
syb01100
Metabolic pathways
syb01110
Biosynthesis of secondary metabolites
syb01200
Carbon metabolism
Module
syb_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
TZ53_00860
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
TZ53_00860
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
TZ53_00860
Enzymes [BR:
syb01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
TZ53_00860
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Motif
Pfam:
GDC-P
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AJR22551
UniProt:
A0A0C5XCV7
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Position
complement(176750..178108)
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AA seq
452 aa
AA seq
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MRYLPLTDTDRQDMLSVIGASSIDDLFVDVPAEARLSDKIAGLPDHASELAVERHMAALA
RKNLSAGEAPFFLGAGAYRHHVPASVDHLIQRGEFLTAYTPYQPEIAQGTLQVLFEFQTQ
VARLLGCDVANASMYDGSTACWEAIGMARRITRRGKAILSSGLHPHYVSVANTMAKFTGD
ALVHQAPTLDAATDTDALIAGIDKDTSCVVVQYPDILGRIADLTPLADAAHAAGALLVAV
VTEPVALGAIRAPGHMDADIVVGEGQSIGVGLQFGGPYLGLFACKQKYVRQMPGRLCGET
VDAAGKRGFVLTLSTREQHIRREKATSNICTNSGLCALAFSIHMTLLGERGLRELAALNH
GLAVQAADRLAQVPGVTLLNDSFFNEFTLILSKDAREVVRNLADKGVLGGVSLGRLFPDA
PAIGNGLVVAVTETVTVEDIEIFAKALEEELA
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcgctacctaccccttaccgataccgaccggcaggacatgctgtccgtcatcggggcg
tcctccattgacgacctgttcgtggacgttcctgccgaggcccgcctttcggacaagatc
gccggcctgcccgaccatgccagcgaactggcggtcgagcgccacatggcggcccttgcg
cggaagaatctgtcggcgggggaagcgcccttcttcctgggtgcgggcgcgtacaggcat
catgtccccgccagcgtcgatcatctgatccagcgcggcgagttcctgacggcctacacc
ccctatcagccggaaatcgcgcagggcaccttgcaggtgctgttcgaattccagacgcag
gtggcgcgcctgctgggctgcgacgtcgccaacgcctccatgtatgacgggtcgaccgcc
tgctgggaagcgatcggcatggcccgccgcatcaccaggcgcggcaaggcgatcctgtcg
tccggcctgcacccccattatgtctcggtcgccaacaccatggcgaagttcaccggcgac
gcgctggtgcatcaggcgccgacgctggacgccgccaccgacaccgacgcgctgatcgcc
gggatcgacaaggatacaagctgcgtcgtcgtccaatatcccgacattctcggccgcatc
gccgacctgacgccgctcgccgatgccgcccacgcggcgggcgcgctgctggtcgcggtc
gtcaccgagccggtcgccctgggtgcgatcagggcgccgggccatatggatgcggacatc
gtcgtcggggaagggcagtccatcggcgtcggcctgcaatttggcgggccttatctgggc
ctgttcgcgtgcaagcagaaatatgtccgccagatgccgggccgcctttgcggcgagacg
gtggacgcggcgggcaagcgcggcttcgtgctgacgctttctacgcgcgagcagcatatc
cgccgtgaaaaggcgacgtcgaacatctgcaccaattccggcctctgcgcgctggcgttc
agcatccatatgacgctgctgggcgaaaggggattgcgggaactggcggcgctcaaccat
gggctggccgttcaggcggccgaccggctggcccaggtgcccggcgtcacgctgctcaac
gacagtttcttcaacgaattcaccctgatcctgtcgaaggacgcccgcgaagtcgtccgc
aacctggcggacaagggcgtgctgggcggcgtctcgctcggtcgcctgttcccggacgcg
ccggcaatcggcaacggactggtcgtcgccgtcaccgaaaccgtgacggtggaggatatc
gaaatcttcgcgaaggcgctggaggaggaactggcatga
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