Sphingobium sp. YBL2: TZ53_12480
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Entry
TZ53_12480 CDS
T03855
Name
(GenBank) hypothetical protein
KO
K21449
trimeric autotransporter adhesin
Organism
syb
Sphingobium sp. YBL2
Brite
KEGG Orthology (KO) [BR:
syb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syb02000
]
TZ53_12480
Transporters [BR:
syb02000
]
Other transporters
Pores ion channels [TC:
1
]
TZ53_12480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
AJR24423
UniProt:
A0A0C5XU04
LinkDB
All DBs
Position
2722268..2727127
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AA seq
1619 aa
AA seq
DB search
MLLLSASFPAAALLANAGGALAAPATVTVPAGAGTGAAVNADIATAITTPANPDLTVTIA
SGADISGASIGYDFVAGGFAAGQGDGAVNLTNDGRVTGLSFGGVGVASAANSFTATSNGE
VVGSVSATDFGGAVSVTNNGSVGGNVVGSGFGDVTLANGLAGEVGGSLIGQALDAANVSI
TNVGTVEGDLDGSATTGTVSIANSGDVAGSAFASTGEGAISVTNAASGRISGDVSAGSES
GAITIANNGQVLGQTDAFSRNTTFTSTGPTTTVSGTTTTTQSSTSQQTVGGDIDGTYAGI
NGSLNFGAGNDGSITQVSGTNSTATVTGTVYGDIYSEASGSSFATQNVAVSTDSRDAAGT
GSVVSSSNNTFNVASTGGTSTVNISGTVAPGDSGRNGDVTSRGDTASAVNINGGKVSGNV
SSTSQGVAFNGAFTSEDTDTYDAGVFQGSTSVSGTQFNQARAGGDASVSLQGSSLVNGNV
SVVGGASASAAIGSAAKVEQDVFVSTAVPTGPFFFTVGDASSTASSTRTTDASGDGTQVD
TSLFTVSAPAVAADATLNNAGRIDGDATVAAGFGNATATITGTVGGSVNASAFASTSSSG
STSEYSVAGGLNTLTSQTVTDSFADAGGQADVVIDTAAALQGKGVPSVAGNVFASGIAGA
SITVGSGSVIGDAATGTGGNLFANSLGESSSDETVTTYAADGFTPVTVASTFSTAAVGGA
ASVTNNGTVIGDVEVQGLTSASLVNNGDLGTGGNLFSVSALDGNSTVTLTDTNPTNAGIR
ALAATVDAMPVGGNASFTNSGNAFGDVELEGLTGSFTNNGILTGTTTLGGSVFSGSATVD
ATINTTNVTVTPVAASQTYTVDQNGVSGGFSVTGAVSTQNEVASALSSLLSPAVPLDASQ
VDPAAFNLTVGGEAAVKTADIKATINLNNGSITLGDIDAQRDDSGAFLTDTTVNLNGSGF
LGASELRSATSTAPANFTPVATLPEEAEGLFGPTAVRVLGVNTVNKTGAGTFVVTGAEYV
PAEGSTPAGWTMDVGNFNVQAGEVQLDVAGADAVFGIKGNINNDATLVLGRRAPTFVQTV
GNSIVTPGPEAIKGIELYQQGNYTQTANGTTVVGVNPSLVRFGNLSVNDGGAAPEVLGPI
TGGVSVPYFTTPTNAGVFSIPSSVTVDGNLNLAGKVAVTVSKDSLYSTGDGYTLFTYTGT
GNVTATAAPTLSSQFVTFDLKHDATAKTVSIEATRNSYATGATNPNAASAAVGLDSALAD
VIARVKTDAAGGNGFASVTEIANAQDIANIAAGLDWRLNSAQAAQVFNELSSAEIYGSLA
AVDQNAVFNTTVNRLAARRGYGEALGTQIWFNPSANFAKTGGTKSGASKIKTNSYGGAFG
LDVAYQEDGAFGIGFGYGQHDVTAQGSQEEAQVRTYTIGAYATQGFGPFYGSFQLAYGFS
KFEVERDLDILARTIEGDFKGKQLDASLELGYDLTAGSGLVVTPYGKLALRRWSMNGFTE
EGGAGIGLKVDHASKTVFSPVLGVKAGALLGDADGIAYRPYAKVQYSFQGSIGSDRTVQY
LGGGDAFRLKGVDPDGNGLIELGVDASVNKRVNLFLSGGYGFGGHNSLGQVRGGISFGF
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgttgtcagcctccttcccagcggcggctctgctcgcaaacgctggtggtgca
ctggcggcgcccgccactgtgaccgtgccggccggggcagggaccggcgcggcggtaaat
gccgacattgccacggccatcacgacgccggctaatcccgatctcacggttacgattgct
agcggcgcagatatcagcggcgcaagcatcggctatgatttcgtcgcaggaggttttgct
gcgggtcagggcgacggcgcggtaaacctcaccaatgatggtcgcgtaaccggcctgagc
ttcggcggagttggcgtggcaagtgccgccaacagcttcaccgccactagcaatggcgaa
gtcgtcggcagcgtaagcgcaacggactttggcggcgcggtatcggtcaccaacaacggc
tcggtcggtggcaatgttgtcggctctggctttggcgatgtcacactcgcaaatggcctg
gctggcgaagtgggtggtagcctgatcgggcaggcgctcgacgccgccaatgtctcgatc
accaacgtcggcacagtcgaaggcgaccttgatggatcggccaccaccggcaccgtcagc
atcgccaacagcggcgatgttgcaggcagcgcctttgcctcgaccggcgaaggggcgatc
tccgtcaccaacgccgcgtctggccgcatcagcggcgatgtgtccgcgggatccgaatcc
ggcgcgatcacgatcgcgaacaatggccaggtcctgggtcagactgacgcgtttagccgc
aatacgacgttcacctcgaccggtccgacgaccactgtttcgggcaccaccacgaccacc
cagtcgagcacttcgcagcagaccgtcggcggcgatatcgatggcacttatgctggcatc
aatggctcgctgaacttcggtgctggcaatgacggcagcatcactcaggtgagcggcacg
aacagcacggcgaccgtgacgggcaccgtgtacggcgacatctattccgaagcgtctggc
tcttcgtttgctacgcagaatgtggccgtgtcgaccgattcgcgcgacgcggcgggcacc
ggctcggtcgtgagcagcagcaacaacacgttcaatgttgcgtcgactggcggcacgagc
acggtcaacatctccggcaccgttgcgcctggcgattcgggccgaaatggcgatgttacc
tctcgcggcgatactgcgagtgccgtcaatatcaacggcggcaaggtgtcgggcaatgtt
tcgtcgaccagccagggcgtggcgttcaacggggcattcacctcggaagacactgacacc
tatgacgcaggcgttttccagggttccacctcggtaagcggcacgcagttcaatcaggcg
cgggcaggcggagacgcttccgtctcgcttcagggcagcagcctggttaacggcaatgtc
agcgttgtgggcggtgcctcggcttcggcagctatcggctcggcagccaaggtcgaacag
gatgtgttcgtcagcacggctgtcccgactggcccattcttcttcaccgtaggcgatgcg
tcctctacagcctccagcacgcggacaacggatgcgtcgggagacggcactcaggtcgac
acgtcgctgtttacggtgtcggctccggctgtcgctgctgatgccacgctcaacaatgcg
ggccgaatcgatggcgatgcgacggttgcagccggcttcggcaacgctacggccacgatc
accggcactgttggcggttcggtgaacgccagcgcgttcgcgtccacctcgagtagcggt
tccacctcggaatatagcgttgctggcggactcaacacgctgacgtcgcaaaccgtcacg
gacagcttcgccgatgctggtggccaagccgatgtcgtgatcgacaccgctgccgcgctt
cagggtaagggcgtgccaagcgttgcaggcaatgtctttgcttcgggcattgctggcgct
tcgatcaccgtcggcagcggcagtgtcatcggtgatgctgcgacgggtacgggcggcaat
ctgtttgccaacagcctgggcgaaagcagcagcgatgagacggtcacgacctacgctgcg
gacggtttcacgcccgtcacggttgcatcgaccttcagcactgccgcggtaggcggtgcc
gcttcggtcaccaacaacggcaccgttattggcgatgtcgaggttcaaggactgacctcc
gcttcgctcgtcaacaatggcgatctgggcaccggcggcaatctgttcagcgtttcggct
ctggatggcaacagcactgtcacgctgaccgacacgaatccgaccaacgctggcatccgc
gccctcgccgcgacggttgacgcaatgccggtgggcggcaacgccagcttcaccaacagc
ggcaacgcctttggcgatgttgagctggaaggcttgaccggatcgttcaccaacaatggc
atcctgaccggcacgaccacgcttggtggttcggtgttcagcggatcggccacggtcgat
gcgacgatcaacaccaccaacgtgaccgtgactcccgttgccgcttcgcagacctacact
gtcgatcaaaacggtgtttcgggtggcttcagcgtgacgggcgcggtttcgacgcagaac
gaggtggcgtctgcgctgtcttcactcctgtcgccggcggttccgctcgatgcctcgcag
gtcgatccggctgcgttcaacctgaccgtgggtggtgaggctgccgtcaagaccgccgac
atcaaggcgacgatcaacctcaacaacggctcgatcacacttggcgacatcgacgcacag
cgtgacgacagcggggccttcctcaccgacacgaccgtcaacctgaatggcagcggcttc
ctaggcgcgagcgaactccgttcggctacctcgacagcgcctgccaacttcacgccggtc
gccacgctgccggaagaagctgaaggcctgttcggtccgaccgccgtccgcgtgttgggc
gtcaacacggtcaacaagaccggtgcgggcaccttcgtggtgacgggtgccgaatatgtt
ccggctgaaggctcgactcccgcaggctggacgatggatgttggcaacttcaacgtgcag
gctggcgaagttcagctggacgttgctggcgccgacgccgtgttcggcatcaagggcaac
atcaacaatgatgccaccctggtcctcggccgtcgtgcaccgaccttcgttcagacggtt
ggcaacagcatcgtcacgccgggacccgaagcgatcaagggcatcgagctctatcagcag
ggcaactacacccagactgccaacggcacgacggttgtgggcgtcaacccctcgctggtc
cgcttcggcaacctgtcagtcaacgatggcggcgcagctcccgaagtgctgggtccgatc
accggtggggtcagtgttccctacttcaccaccccgaccaatgccggtgtcttctcgatc
ccgtcgtcggtcactgtggacggtaacctgaacctggccggtaaggtcgcggtgacggtg
tcgaaggatagcctctattcgacgggcgacggctatacgctgttcacctataccggtacc
ggcaatgtcaccgccaccgcggcaccgacgctctcctcgcagttcgtcactttcgatctg
aagcatgatgcgaccgctaagaccgtttcgatcgaggcgacccgcaacagctacgccacg
ggcgcaaccaatcccaatgccgcttcggcagccgtgggtctggacagcgcgctggctgac
gtcattgctcgggtgaagacggatgctgctggcggcaatggctttgcttcggttacggag
atcgccaatgcgcaggacatcgccaacatcgctgctggtctcgactggcgcctgaacagc
gcacaggcggcgcaggtcttcaacgagctttcctcggcggagatctacggttcgctggcc
gcggttgatcagaacgcggttttcaacaccaccgtcaaccgtctggctgctcgccgtggc
tatggtgaggcgctgggcacccagatctggttcaacccgtcggcgaacttcgccaagacg
gggggcaccaagtccggagcgtcgaagatcaagaccaacagctatggcggcgcctttggc
ctcgacgtggcctatcaggaagacggcgccttcggcatcggctttggctatggtcagcat
gacgtcactgcacagggttcgcaggaagaggcgcaggttcgcacctacaccatcggtgcc
tatgcgacccagggctttggccccttctacggcagcttccagttggcgtacggcttctcg
aaatttgaagtcgaacgcgacctggacatcctggctcgcaccattgaaggtgacttcaag
ggcaagcagttggatgccagcctggagctgggctacgacttgaccgccggtagcggcctg
gtcgtgaccccctatggtaagctggcgctgcgtcgctggtcgatgaacggcttcactgaa
gaaggtggcgctggcatcggactgaaggtggatcatgcctccaagaccgtcttctcgccc
gttctgggcgtgaaggccggggctctgctcggtgacgccgatgggatcgcctatcgcccc
tatgcgaaggttcagtacagcttccagggcagcatcggcagcgatcgcacggtccagtat
ctgggcggcggggatgccttccgcctgaagggtgtggatccggacggtaacgggctgatc
gaactgggcgtggatgcctcggtcaataagcgcgtcaacctgttcctctctggcggttac
ggctttggtggccacaacagcctcggccaggtccgtggtggcattagcttcggcttctga
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