Synechococcus sp. CC9311: sync_1500
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Entry
sync_1500 CDS
T00390
Name
(GenBank) possible porin
Organism
syg
Synechococcus sp. CC9311
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Gene cluster
GFIT
Motif
Pfam:
OprB
SLH
OEP
Motif
Other DBs
NCBI-ProteinID:
ABI46984
CyanoBase:
sync_1500
UniProt:
Q0IA17
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Position
complement(1381029..1382603)
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AA seq
524 aa
AA seq
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MRPVLKLFQQLLVAPAALGLLAPLAANATELNINGVSDYAASGEQVTSITQFSDVYPTDW
AYQALSNLIERYGCVAGYPNGTYRGNRAMTRFEAAALLNACLDRVTEVTDELKRLMKEFE
KELAILKGRVDGLEARVGELEATQFSTTTKLSGLATFVVGANNFSGTKSKADPANRDFGA
TTFNYDLQLSLETSFTGKDLLITILRSGNFGENSVFGGNPNGLSTLETAFQEDSGANSVG
IDKLYYQFPVANSLTFTLGARVGQEDMLAVWPSAYPSDPILDVTTLNGAPAAYNKNLGPG
AGVSWSTDSGFSISANYVAAQGSSSDPNAGGIGTEFSEASGTVQLAYESENWNIAAIWSG
VQSPSELVGGFGTTFAADNYFSGRKAFMNAWGIGGSWQPQESGWIPSISAGYGYNALYAK
NVGDVTTSQSWNLGLEWSDVFLKGNNAGMAVGQPVFATDLKGDEVPADGNYVWEWWYQFQ
VTDNISVTPALFYLSRPEGQNTDLNGGDDTLSQLGGLVKTTFKF
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
gtgaggcccgttttgaaacttttccaacaactgttggtggctccagctgcattgggcctt
ttggcacctttggctgcaaacgccactgagctcaatatcaatggtgtgtctgactacgcc
gcctctggcgagcaagtcaccagcatcactcagttttctgacgtttacccaaccgattgg
gcttatcaggctcttagcaacctgatcgagcgctacggctgtgtggccggttaccccaac
ggcacctaccgcggtaacagggcaatgacccgctttgaagcggctgctctgttgaacgcc
tgtctcgaccgcgtcaccgaagtgaccgacgagctgaagcgcctgatgaaggagttcgaa
aaggaactcgccatcctcaagggccgtgttgacggacttgaagcccgcgttggtgaactg
gaagcaactcagttctccaccaccaccaagctttctggattggcaacgtttgttgttggt
gcgaataatttttctggaaccaaatcgaaagccgatcctgcgaacagagactttggtgcc
actacatttaattatgacctccaattaagccttgaaactagtttcactggaaaagattta
ttaattacaatcttaaggtcaggcaattttggtgagaactctgtattcggtggcaatcca
aacggcttatcaaccctagaaacagcatttcaggaagattctggtgccaactctgttggt
atcgacaagctttactatcaattccccgtcgctaactcgctgactttcacgcttggagcc
cgtgttggtcaggaagacatgcttgctgtttggcctagtgcttatccaagtgatccaatc
ttggatgtcacaaccctcaatggtgctccagctgcttacaacaaaaacctgggaccagga
gccggtgttagttggtctactgatagcggtttcagtatctctgcaaattatgttgctgct
caaggttcgagttcagaccctaatgctggtggtataggaactgaattctctgaggcttca
ggcacggtacaacttgcttatgaatcagaaaactggaacattgccgctatttggtcaggc
gttcaaagtccatctgaattagttggtggattcggcactacattcgctgcagacaactac
ttttctggccgaaaagcctttatgaatgcttggggtattggcggctcttggcagccacaa
gagagtggttggattccatcaatctctgcaggatatggatacaatgctttatatgctaag
aatgttggtgatgtcacaacaagtcaatcatggaatcttggcttggaatggagtgacgtc
ttcctgaagggcaacaatgcaggcatggccgtaggtcaacccgtatttgctacagatttg
aagggcgatgaagttcctgcagatggcaactatgtatgggaatggtggtatcaattccag
gtcactgacaacattagcgttacgcccgcattgttctatttaagtcgtcctgaaggtcag
aatactgatctaaatggtggcgatgatactttaagtcagcttggtggattggtaaaaaca
accttcaaattctaa
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